Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ANLKHKMJ_77 | 54687 | 55394 | WalR | 2.30e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| ANLKHKMJ_45 | 11467 | 11664 | CspR | 1.60e-28 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| ANLKHKMJ_45 | 11467 | 11661 | CspA | 7.81e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ANLKHKMJ_1 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_2 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_3 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_4 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_5 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_6 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_7 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_8 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_9 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_10 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_11 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_12 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_13 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_14 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_15 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_16 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_17 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_18 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_19 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_20 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_21 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_22 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_23 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_24 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_26 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_27 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_28 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_29 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_30 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_31 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_32 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_33 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_34 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_35 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_36 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_37 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_38 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_39 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_40 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_41 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_42 | 1.0 | 0.0 | 1.0 |
| ANLKHKMJ_45 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_56 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_67 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_76 | 0.0 | 1.0 | 0.0 |
| ANLKHKMJ_77 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ANLKHKMJ_1 | 267596 | 288245 | False | Siphoviridae | VOG3303, VOG3299, VOG8294, VOG0703, VOG1637, VOG4705, VOG4334, VOG4683, VOG6163, VOG4633, VOG3636, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG10914, VOG4564, VOG0720, VOG5532 |
| ANLKHKMJ_13 | 7813 | 29679 | False | Siphoviridae | VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4555, VOG0692, VOG0691, VOG4544, VOG3699, VOG8681, VOG1406, VOG0198, VOG0195, VOG8279, VOG0275, VOG5562, VOG5998, VOG0327, VOG4609, VOG4632, VOG6545, VOG0322, VOG4548, VOG0321, VOG3947 |
| ANLKHKMJ_67 | 6287 | 21613 | False | Siphoviridae | VOG9629, VOG1125, VOG4586, VOG0207, VOG9583, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0638, VOG4799, VOG0514, VOG6545, VOG0322, VOG0685 |
Phigaro v2.4.0 (Database: Jan. 2024 release)