Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FPGNHDDM_31 | 95567 | 97486 | tet(O) | ARO:3000190 | tet(O) | 99.06 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FPGNHDDM_31 | 95567 | 97486 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.38 | 100.00 | M18896 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FPGNHDDM_31 | 95570 | 97486 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.53 | 100.00 | WP_012669445.1 |
| FPGNHDDM_100 | 7568 | 7768 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FPGNHDDM_1 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_2 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_3 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_4 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_5 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_6 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_7 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_9 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_10 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_11 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_13 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_14 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_15 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_16 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_17 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_18 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_19 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_20 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_22 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_23 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_26 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_29 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_30 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_31 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_32 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_33 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_34 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_35 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_36 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_37 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_38 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_40 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_41 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_42 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_43 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_44 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_45 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_46 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_47 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_48 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_49 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_50 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_51 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_52 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_53 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_54 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_55 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_56 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_57 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_59 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_60 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_61 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_62 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_63 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_64 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_65 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_66 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_67 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_68 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_69 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_70 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_71 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_72 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_73 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_74 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_75 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_76 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_77 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_78 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_79 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_80 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_81 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_82 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_83 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_84 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_85 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_86 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_87 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_88 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_89 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_90 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_91 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_92 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_93 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_94 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_95 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_96 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_97 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_98 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_99 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_100 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_101 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_102 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_103 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_104 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_105 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_107 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_108 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_109 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_110 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_111 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_112 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_113 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_114 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_115 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_117 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_118 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_119 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_120 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_121 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_122 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_123 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_124 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_125 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_126 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_127 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_128 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_129 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_130 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_131 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_132 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_133 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_134 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_135 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_136 | 1.0 | 0.0 | 1.0 |
| FPGNHDDM_137 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_138 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_139 | 0.0 | 1.0 | 0.0 |
| FPGNHDDM_140 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FPGNHDDM_11 | 12259 | 21865 | False | Siphoviridae | VOG1335, |
| FPGNHDDM_45 | 58851 | 65524 | False | Siphoviridae | VOG0691, |
Phigaro v2.4.0 (Database: Jan. 2024 release)