Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FMJINOJO_56 | 23962 | 25881 | tet(O) | ARO:3000190 | tet(O) | 99.06 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FMJINOJO_56 | 23962 | 25881 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.38 | 100.00 | M18896 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FMJINOJO_56 | 23965 | 25881 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.53 | 100.00 | WP_012669445.1 |
| FMJINOJO_68 | 7568 | 7768 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FMJINOJO_101 | 1191 | 1771 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FMJINOJO_1 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_2 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_3 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_4 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_5 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_6 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_7 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_8 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_9 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_10 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_11 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_12 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_13 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_14 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_16 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_17 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_18 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_19 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_20 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_21 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_22 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_23 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_25 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_26 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_27 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_28 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_29 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_30 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_31 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_32 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_33 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_34 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_35 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_36 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_37 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_38 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_39 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_40 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_42 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_43 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_44 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_45 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_46 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_47 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_48 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_49 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_50 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_51 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_52 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_53 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_54 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_55 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_56 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_57 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_58 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_59 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_60 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_61 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_62 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_63 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_64 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_65 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_66 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_67 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_68 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_69 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_70 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_71 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_72 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_73 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_74 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_75 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_76 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_77 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_78 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_79 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_80 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_81 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_82 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_83 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_84 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_85 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_86 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_87 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_88 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_89 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_90 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_91 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_92 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_93 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_94 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_95 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_96 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_97 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_98 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_99 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_100 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_101 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_102 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_103 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_104 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_105 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_106 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_107 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_108 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_110 | 0.0 | 1.0 | 0.0 |
| FMJINOJO_111 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_112 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_113 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_114 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_115 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_116 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_117 | 1.0 | 0.0 | 1.0 |
| FMJINOJO_118 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FMJINOJO_40 | 58851 | 71107 | False | Siphoviridae | VOG0691, |
| FMJINOJO_107 | 19988 | 35320 | False | Siphoviridae | VOG6495, |
Phigaro v2.4.0 (Database: Jan. 2024 release)