Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HOOHMNPF_153 | 61775 | 63694 | tet(O) | ARO:3000190 | tet(O) | 99.06 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HOOHMNPF_153 | 61775 | 63694 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.38 | 100.00 | M18896 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HOOHMNPF_153 | 61775 | 63691 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.53 | 100.00 | WP_012669445.1 |
| HOOHMNPF_184 | 7568 | 7768 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| HOOHMNPF_4 | 136 | 716 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HOOHMNPF_1 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_2 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_3 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_4 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_6 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_7 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_8 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_10 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_11 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_12 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_13 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_16 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_17 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_18 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_19 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_20 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_21 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_23 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_24 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_26 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_27 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_28 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_29 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_30 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_31 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_32 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_33 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_34 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_35 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_36 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_37 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_38 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_39 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_40 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_41 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_43 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_44 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_45 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_46 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_48 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_49 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_50 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_51 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_53 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_54 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_55 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_56 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_57 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_58 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_59 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_60 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_61 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_62 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_63 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_64 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_65 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_66 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_67 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_69 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_70 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_71 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_72 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_73 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_74 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_75 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_76 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_77 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_78 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_79 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_80 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_81 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_82 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_83 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_84 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_85 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_86 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_87 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_88 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_89 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_90 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_91 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_92 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_93 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_94 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_95 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_96 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_97 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_98 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_99 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_100 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_101 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_102 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_103 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_104 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_105 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_106 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_107 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_108 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_109 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_110 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_111 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_112 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_113 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_114 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_115 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_116 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_117 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_119 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_120 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_121 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_122 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_123 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_124 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_125 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_126 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_127 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_128 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_129 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_130 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_131 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_132 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_133 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_134 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_136 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_137 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_138 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_139 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_140 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_141 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_142 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_143 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_144 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_145 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_146 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_147 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_148 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_149 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_150 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_151 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_152 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_153 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_154 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_155 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_156 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_157 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_158 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_159 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_160 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_161 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_162 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_163 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_164 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_165 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_166 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_167 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_168 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_169 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_171 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_172 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_173 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_174 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_175 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_176 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_177 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_178 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_179 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_180 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_181 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_182 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_183 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_184 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_185 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_187 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_188 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_189 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_190 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_191 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_192 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_193 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_194 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_195 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_196 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_197 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_198 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_199 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_201 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_202 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_203 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_204 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_205 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_206 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_207 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_208 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_209 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_210 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_211 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_212 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_213 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_214 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_215 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_216 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_217 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_218 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_219 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_220 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_221 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_222 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_223 | 0.0 | 1.0 | 0.0 |
| HOOHMNPF_225 | 1.0 | 0.0 | 1.0 |
| HOOHMNPF_226 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HOOHMNPF_132 | 58851 | 65524 | False | Siphoviridae | VOG0691, |
| HOOHMNPF_215 | 13759 | 29323 | False | Siphoviridae | VOG5668, |
Phigaro v2.4.0 (Database: Jan. 2024 release)