Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NMJOGCBH_22 | 801 | 2720 | tet(O) | ARO:3000190 | tet(O) | 99.06 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NMJOGCBH_22 | 801 | 2720 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.38 | 100.00 | M18896 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NMJOGCBH_22 | 801 | 2717 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.53 | 100.00 | WP_012669445.1 |
| NMJOGCBH_149 | 4290 | 4490 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NMJOGCBH_1 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_2 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_3 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_4 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_5 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_6 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_7 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_8 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_9 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_10 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_11 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_12 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_13 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_14 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_15 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_16 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_17 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_18 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_19 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_21 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_22 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_23 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_24 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_25 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_26 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_27 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_28 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_29 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_30 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_31 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_32 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_33 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_34 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_35 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_36 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_37 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_38 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_39 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_40 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_41 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_42 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_43 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_44 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_45 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_46 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_47 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_48 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_49 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_50 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_51 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_52 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_53 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_54 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_55 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_56 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_58 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_59 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_60 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_61 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_63 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_64 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_65 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_66 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_67 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_68 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_69 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_70 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_71 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_72 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_73 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_74 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_75 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_78 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_79 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_80 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_81 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_82 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_83 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_84 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_85 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_86 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_87 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_88 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_89 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_90 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_91 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_92 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_93 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_94 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_95 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_96 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_97 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_98 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_99 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_100 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_101 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_102 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_103 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_104 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_105 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_106 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_107 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_108 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_109 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_110 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_111 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_112 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_113 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_114 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_115 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_116 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_117 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_118 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_119 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_120 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_121 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_122 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_123 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_124 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_125 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_126 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_127 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_128 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_129 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_130 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_131 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_132 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_133 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_134 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_135 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_136 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_137 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_138 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_139 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_140 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_141 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_142 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_143 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_144 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_145 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_146 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_147 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_148 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_149 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_150 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_151 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_152 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_153 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_154 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_155 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_156 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_157 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_158 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_159 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_160 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_161 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_162 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_163 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_164 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_165 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_166 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_167 | 1.0 | 0.0 | 1.0 |
| NMJOGCBH_168 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_169 | 0.0 | 1.0 | 0.0 |
| NMJOGCBH_170 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NMJOGCBH_75 | 46803 | 53476 | False | Siphoviridae | VOG0691, |
| NMJOGCBH_91 | 21753 | 35279 | False | Siphoviridae | VOG9113, |
Phigaro v2.4.0 (Database: Jan. 2024 release)