Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ONDAIIMA_30 | 110300 | 112219 | tet(O) | ARO:3000190 | tet(O) | 99.06 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ONDAIIMA_30 | 110300 | 112219 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.38 | 100.00 | M18896 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ONDAIIMA_30 | 110300 | 112216 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.53 | 100.00 | WP_012669445.1 |
| ONDAIIMA_81 | 8316 | 8516 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| ONDAIIMA_113 | 135 | 715 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ONDAIIMA_1 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_2 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_3 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_4 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_5 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_6 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_7 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_9 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_11 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_12 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_14 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_15 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_16 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_17 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_18 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_19 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_21 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_22 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_23 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_25 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_26 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_27 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_29 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_30 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_31 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_32 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_33 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_34 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_35 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_36 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_37 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_38 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_39 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_40 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_41 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_42 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_43 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_44 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_45 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_46 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_47 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_48 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_49 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_50 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_51 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_52 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_53 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_54 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_55 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_56 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_57 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_58 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_59 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_60 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_61 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_62 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_63 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_64 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_65 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_66 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_67 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_68 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_69 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_70 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_71 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_72 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_73 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_74 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_75 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_76 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_77 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_78 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_79 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_80 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_81 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_82 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_83 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_84 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_85 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_86 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_87 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_88 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_89 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_90 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_91 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_92 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_93 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_94 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_95 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_96 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_97 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_98 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_99 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_100 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_101 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_102 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_103 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_104 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_105 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_106 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_107 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_109 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_110 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_111 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_112 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_113 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_114 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_115 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_116 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_117 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_118 | 0.0 | 1.0 | 0.0 |
| ONDAIIMA_120 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_121 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_122 | 1.0 | 0.0 | 1.0 |
| ONDAIIMA_123 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ONDAIIMA_21 | 10444 | 21865 | False | Siphoviridae | VOG10901, |
| ONDAIIMA_34 | 58851 | 65524 | False | Siphoviridae | VOG0691, |
Phigaro v2.4.0 (Database: Jan. 2024 release)