Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DPPBNJOG_91 | 1680 | 3599 | tet(O) | ARO:3000190 | tet(O) | 97.50 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DPPBNJOG_129 | 24954 | 26053 | tet(40) | Doxycycline, Tetracycline | 99.36 | 90.09 | FJ158002 |
| DPPBNJOG_91 | 1680 | 3599 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.27 | 100.00 | Y07780 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DPPBNJOG_91 | 1683 | 3599 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.06 | 100.00 | WP_014636291.1 |
| DPPBNJOG_129 | 24957 | 26126 | tet(40) | tetracycline efflux MFS transporter Tet(40) | INTERNAL_STOP | 92.41 | 97.29 | WP_009247026.1 |
| DPPBNJOG_125 | 11437 | 11637 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DPPBNJOG_1 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_2 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_3 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_4 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_5 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_6 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_7 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_8 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_9 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_10 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_11 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_12 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_13 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_14 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_15 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_17 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_18 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_19 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_20 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_22 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_24 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_25 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_27 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_28 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_29 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_30 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_31 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_32 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_33 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_34 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_35 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_36 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_37 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_38 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_39 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_40 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_42 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_43 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_44 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_45 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_46 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_47 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_48 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_49 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_51 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_52 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_53 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_54 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_55 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_56 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_58 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_59 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_60 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_61 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_62 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_63 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_64 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_65 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_66 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_67 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_69 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_70 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_71 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_72 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_73 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_74 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_75 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_77 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_78 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_79 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_81 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_82 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_83 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_84 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_85 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_86 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_87 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_88 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_89 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_90 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_91 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_92 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_93 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_94 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_95 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_96 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_97 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_98 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_99 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_100 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_101 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_102 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_103 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_104 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_105 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_106 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_107 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_108 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_109 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_110 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_111 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_112 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_113 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_114 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_115 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_116 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_117 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_118 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_119 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_120 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_121 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_122 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_123 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_124 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_125 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_126 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_127 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_128 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_129 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_130 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_131 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_132 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_133 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_134 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_135 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_136 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_137 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_138 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_139 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_140 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_141 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_142 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_143 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_144 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_145 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_146 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_147 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_148 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_149 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_150 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_151 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_152 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_153 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_154 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_155 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_156 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_157 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_158 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_159 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_160 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_161 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_162 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_163 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_164 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_165 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_166 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_167 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_168 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_169 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_170 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_171 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_172 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_173 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_174 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_175 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_176 | 1.0 | 0.0 | 1.0 |
| DPPBNJOG_177 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_178 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_179 | 0.0 | 1.0 | 0.0 |
| DPPBNJOG_180 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DPPBNJOG_88 | 104885 | 112804 | False | Siphoviridae | VOG4545, |
| DPPBNJOG_125 | 38625 | 53957 | False | Siphoviridae | VOG6495, |
| DPPBNJOG_136 | 90065 | 107102 | False | Siphoviridae | VOG2352, |
| DPPBNJOG_169 | 5227 | 18510 | True | Unknown | VOG0275, |
Phigaro v2.4.0 (Database: Jan. 2024 release)