Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OEOHBPAH_53 | 342 | 2261 | tet(O) | ARO:3000190 | tet(O) | 97.50 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OEOHBPAH_204 | 24954 | 26053 | tet(40) | Doxycycline, Tetracycline | 99.36 | 90.09 | FJ158002 |
| OEOHBPAH_53 | 342 | 2261 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.27 | 100.00 | Y07780 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OEOHBPAH_53 | 345 | 2261 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.06 | 100.00 | WP_014636291.1 |
| OEOHBPAH_204 | 24957 | 26126 | tet(40) | tetracycline efflux MFS transporter Tet(40) | INTERNAL_STOP | 92.41 | 97.29 | WP_009247026.1 |
| OEOHBPAH_202 | 11437 | 11637 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OEOHBPAH_1 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_2 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_3 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_4 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_5 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_6 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_7 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_8 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_9 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_10 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_11 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_12 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_13 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_14 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_15 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_16 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_17 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_18 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_19 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_21 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_22 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_23 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_24 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_25 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_26 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_27 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_29 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_31 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_32 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_33 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_35 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_36 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_37 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_38 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_39 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_40 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_41 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_42 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_43 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_44 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_45 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_46 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_47 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_48 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_49 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_50 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_52 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_53 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_54 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_55 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_56 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_57 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_58 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_59 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_60 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_61 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_62 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_63 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_64 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_65 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_66 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_67 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_68 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_69 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_70 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_71 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_72 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_74 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_75 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_76 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_77 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_78 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_79 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_80 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_81 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_82 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_83 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_84 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_85 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_86 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_87 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_88 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_89 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_90 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_91 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_92 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_93 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_94 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_95 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_96 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_97 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_98 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_99 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_100 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_101 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_102 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_103 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_104 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_105 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_107 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_108 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_109 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_110 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_111 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_112 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_113 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_114 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_115 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_116 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_118 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_119 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_120 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_121 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_122 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_123 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_124 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_125 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_126 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_127 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_128 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_129 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_130 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_131 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_133 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_134 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_135 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_136 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_137 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_138 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_139 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_140 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_141 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_142 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_144 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_145 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_146 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_147 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_148 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_149 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_150 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_151 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_152 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_153 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_155 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_156 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_158 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_159 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_160 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_161 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_162 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_163 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_164 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_165 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_166 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_167 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_168 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_169 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_170 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_171 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_172 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_173 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_174 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_175 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_176 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_177 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_178 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_179 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_180 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_181 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_182 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_183 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_184 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_185 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_186 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_187 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_188 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_189 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_190 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_191 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_192 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_193 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_194 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_195 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_196 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_197 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_198 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_199 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_200 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_201 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_202 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_203 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_204 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_205 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_206 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_207 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_208 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_209 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_210 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_211 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_212 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_213 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_214 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_215 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_216 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_217 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_218 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_219 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_220 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_221 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_222 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_223 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_224 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_225 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_226 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_227 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_228 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_229 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_230 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_231 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_232 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_233 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_234 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_235 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_236 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_237 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_238 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_239 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_240 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_241 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_242 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_243 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_244 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_245 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_246 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_247 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_248 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_249 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_250 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_252 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_253 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_254 | 0.0 | 1.0 | 0.0 |
| OEOHBPAH_255 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_256 | 1.0 | 0.0 | 1.0 |
| OEOHBPAH_257 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OEOHBPAH_111 | 104885 | 112804 | False | Siphoviridae | VOG4545, |
| OEOHBPAH_191 | 114622 | 127905 | True | Unknown | VOG5036, |
| OEOHBPAH_202 | 38625 | 53957 | False | Siphoviridae | VOG6495, |
| OEOHBPAH_213 | 90065 | 107102 | False | Siphoviridae | VOG2352, |
Phigaro v2.4.0 (Database: Jan. 2024 release)