Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EOGDNDGO_88 | 342 | 2261 | tet(O) | ARO:3000190 | tet(O) | 97.50 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EOGDNDGO_121 | 25273 | 26372 | tet(40) | Doxycycline, Tetracycline | 99.36 | 90.09 | FJ158002 |
| EOGDNDGO_88 | 342 | 2261 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.27 | 100.00 | Y07780 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EOGDNDGO_88 | 345 | 2261 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.06 | 100.00 | WP_014636291.1 |
| EOGDNDGO_121 | 25276 | 26445 | tet(40) | tetracycline efflux MFS transporter Tet(40) | INTERNAL_STOP | 92.41 | 97.29 | WP_009247026.1 |
| EOGDNDGO_144 | 7568 | 7768 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EOGDNDGO_1 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_2 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_3 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_4 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_5 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_6 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_7 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_8 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_9 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_10 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_11 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_12 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_13 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_14 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_15 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_16 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_17 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_19 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_20 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_21 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_22 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_23 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_24 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_25 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_27 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_29 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_30 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_31 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_32 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_33 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_34 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_35 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_36 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_37 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_38 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_39 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_40 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_41 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_43 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_44 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_46 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_47 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_49 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_50 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_51 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_52 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_53 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_55 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_56 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_57 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_58 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_59 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_60 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_61 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_62 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_63 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_64 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_65 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_66 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_67 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_68 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_70 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_71 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_72 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_73 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_75 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_76 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_77 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_78 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_79 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_80 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_81 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_82 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_83 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_84 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_85 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_86 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_87 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_88 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_89 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_90 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_91 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_92 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_93 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_94 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_95 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_96 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_97 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_98 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_99 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_100 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_101 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_102 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_103 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_104 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_105 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_106 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_107 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_108 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_109 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_110 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_111 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_112 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_113 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_114 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_115 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_116 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_117 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_118 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_119 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_120 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_121 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_122 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_123 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_124 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_125 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_126 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_127 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_128 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_129 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_130 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_131 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_132 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_133 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_134 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_135 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_136 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_137 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_138 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_139 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_140 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_141 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_142 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_143 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_144 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_145 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_146 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_147 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_148 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_149 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_150 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_151 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_153 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_154 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_155 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_156 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_157 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_158 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_159 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_160 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_161 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_162 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_163 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_164 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_165 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_167 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_168 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_169 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_170 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_171 | 1.0 | 0.0 | 1.0 |
| EOGDNDGO_172 | 0.0 | 1.0 | 0.0 |
| EOGDNDGO_173 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EOGDNDGO_85 | 104765 | 112684 | False | Siphoviridae | VOG4545, |
| EOGDNDGO_118 | 90065 | 107102 | False | Siphoviridae | VOG2352, |
| EOGDNDGO_140 | 19764 | 35328 | False | Siphoviridae | VOG5668, |
| EOGDNDGO_151 | 5227 | 18510 | True | Unknown | VOG0275, |
Phigaro v2.4.0 (Database: Jan. 2024 release)