Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ICBEKFLC_46 | 588 | 2507 | tet(O) | ARO:3000190 | tet(O) | 97.50 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ICBEKFLC_132 | 25059 | 26158 | tet(40) | Doxycycline, Tetracycline | 99.36 | 90.09 | FJ158002 |
| ICBEKFLC_46 | 588 | 2507 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.27 | 100.00 | Y07780 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ICBEKFLC_46 | 588 | 2504 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.06 | 100.00 | WP_014636291.1 |
| ICBEKFLC_132 | 25062 | 26231 | tet(40) | tetracycline efflux MFS transporter Tet(40) | INTERNAL_STOP | 92.41 | 97.29 | WP_009247026.1 |
| ICBEKFLC_105 | 11437 | 11637 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ICBEKFLC_1 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_2 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_3 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_4 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_5 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_6 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_7 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_8 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_9 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_10 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_11 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_12 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_13 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_14 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_15 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_16 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_17 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_18 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_19 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_21 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_22 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_23 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_24 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_25 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_26 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_27 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_30 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_32 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_33 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_34 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_35 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_36 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_37 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_38 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_39 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_40 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_41 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_42 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_43 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_44 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_46 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_47 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_48 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_49 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_50 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_51 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_52 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_53 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_54 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_55 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_56 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_58 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_59 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_60 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_61 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_62 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_63 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_64 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_65 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_66 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_68 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_69 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_70 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_71 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_73 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_74 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_75 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_76 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_77 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_79 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_80 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_81 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_82 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_83 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_84 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_85 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_86 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_87 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_88 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_89 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_90 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_91 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_92 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_93 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_94 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_95 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_96 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_97 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_98 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_99 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_100 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_101 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_102 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_103 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_104 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_105 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_106 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_107 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_108 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_109 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_110 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_111 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_112 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_113 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_114 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_115 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_116 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_117 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_118 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_119 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_120 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_121 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_122 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_123 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_124 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_125 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_126 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_127 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_128 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_129 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_130 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_131 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_132 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_133 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_134 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_135 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_136 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_137 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_138 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_139 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_140 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_141 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_142 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_143 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_144 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_145 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_146 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_147 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_148 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_149 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_150 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_151 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_152 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_153 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_154 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_155 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_156 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_157 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_158 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_159 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_160 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_161 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_162 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_163 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_164 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_165 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_167 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_168 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_169 | 0.0 | 1.0 | 0.0 |
| ICBEKFLC_170 | 1.0 | 0.0 | 1.0 |
| ICBEKFLC_171 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ICBEKFLC_83 | 104825 | 112744 | False | Siphoviridae | VOG4545, |
| ICBEKFLC_86 | 90066 | 107595 | False | Siphoviridae | VOG2352, |
| ICBEKFLC_105 | 38393 | 53957 | False | Siphoviridae | VOG5668, |
| ICBEKFLC_138 | 5227 | 18510 | True | Unknown | VOG0275, |
Phigaro v2.4.0 (Database: Jan. 2024 release)