Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PMBENBIK_264 | 127205 | 125625 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PMBENBIK_7 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_8 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_9 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_10 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_11 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_18 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_24 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_26 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_27 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_28 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_34 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_35 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_36 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_37 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_38 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_39 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_42 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_47 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_48 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_53 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_59 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_61 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_66 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_67 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_69 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_77 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_87 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_88 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_89 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_90 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_91 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_98 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_99 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_100 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_101 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_103 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_105 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_106 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_107 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_108 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_109 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_110 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_111 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_112 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_113 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_114 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_115 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_116 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_117 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_118 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_119 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_120 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_121 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_122 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_125 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_126 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_127 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_128 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_129 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_130 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_132 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_133 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_134 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_135 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_136 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_137 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_138 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_141 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_144 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_147 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_148 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_149 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_150 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_151 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_152 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_153 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_154 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_155 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_159 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_160 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_161 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_162 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_163 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_164 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_165 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_167 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_168 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_169 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_170 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_171 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_172 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_173 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_174 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_175 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_176 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_177 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_178 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_179 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_180 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_181 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_182 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_183 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_184 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_186 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_188 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_189 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_190 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_191 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_192 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_193 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_195 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_196 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_197 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_198 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_199 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_200 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_205 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_206 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_207 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_208 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_209 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_210 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_211 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_212 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_213 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_214 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_215 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_216 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_217 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_218 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_219 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_220 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_221 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_222 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_223 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_224 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_225 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_226 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_227 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_228 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_229 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_231 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_232 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_233 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_235 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_236 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_237 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_238 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_239 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_240 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_241 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_242 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_243 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_244 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_248 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_249 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_256 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_257 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_258 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_260 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_262 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_263 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_264 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_265 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_266 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_267 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_268 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_269 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_270 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_271 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_273 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_274 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_275 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_276 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_278 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_285 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_286 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_287 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_288 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_289 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_290 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_291 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_292 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_293 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_295 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_297 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_299 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_300 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_302 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_303 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_306 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_309 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_310 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_312 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_313 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_314 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_315 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_316 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_317 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_318 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_319 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_321 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_322 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_323 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_325 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_327 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_328 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_329 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_330 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_331 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_332 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_333 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_335 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_336 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_337 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_339 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_340 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_341 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_344 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_346 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_350 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_351 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_353 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_365 | 1.0 | 0.0 | 1.0 |
| PMBENBIK_374 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_377 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_378 | 0.0 | 1.0 | 0.0 |
| PMBENBIK_379 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PMBENBIK_183 | 2240 | 11529 | False | Siphoviridae | VOG4618, |
Phigaro v2.4.0 (Database: Jan. 2024 release)