Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JKMAHBGM_2 | 83250 | 83954 | WalR | 7.04e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| JKMAHBGM_45 | 7030 | 7224 | CspR | 9.24e-31 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| JKMAHBGM_45 | 7030 | 7227 | CspA | 1.42e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JKMAHBGM_74 | 6841 | 7715 | rep28 | 875 / 930 | 99.77 | CP003162 |
| JKMAHBGM_109 | 1 | 859 | repUS64 | 866 / 954 | 85.10 | JN601038 |
| JKMAHBGM_80 | 1856 | 2890 | rep38 | 1045 / 1104 | 83.54 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JKMAHBGM_1 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_2 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_3 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_4 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_5 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_6 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_7 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_8 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_9 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_10 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_11 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_12 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_13 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_14 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_15 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_16 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_17 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_18 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_19 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_20 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_21 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_22 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_23 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_24 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_25 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_26 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_27 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_28 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_29 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_30 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_31 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_32 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_33 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_34 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_35 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_36 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_37 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_38 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_39 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_40 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_41 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_42 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_43 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_44 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_45 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_46 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_47 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_48 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_49 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_50 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_51 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_52 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_53 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_54 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_55 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_56 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_57 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_58 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_59 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_60 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_61 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_62 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_63 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_64 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_65 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_66 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_67 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_68 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_69 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_70 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_71 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_72 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_73 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_74 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_75 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_76 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_77 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_78 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_79 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_80 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_81 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_82 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_83 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_84 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_85 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_86 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_87 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_88 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_89 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_90 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_91 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_93 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_94 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_95 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_96 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_97 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_98 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_99 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_100 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_101 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_102 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_103 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_104 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_105 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_107 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_108 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_109 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_110 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_111 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_112 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_113 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_114 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_115 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_116 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_117 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_118 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_119 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_120 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_121 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_122 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_123 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_124 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_125 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_126 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_127 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_128 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_129 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_130 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_131 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_132 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_133 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_134 | 0.0 | 1.0 | 0.0 |
| JKMAHBGM_135 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_136 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_137 | 1.0 | 0.0 | 1.0 |
| JKMAHBGM_138 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JKMAHBGM_35 | 4978 | 31551 | False | Siphoviridae | VOG0283, VOG0226, VOG4566, VOG4552, VOG4693, VOG10015, VOG0044, VOG0198, VOG5709, VOG0045, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG9583, VOG0724, VOG0799, VOG0725, VOG4545, VOG0801, VOG3462, VOG4619, VOG4856, VOG9640, VOG0804, VOG7896 |
| JKMAHBGM_37 | 1834 | 25618 | False | Siphoviridae | VOG10957, VOG4599, VOG4605, VOG5904, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG3643 |
Phigaro v2.4.0 (Database: Jan. 2024 release)