Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EKBLOECO_388 | 64617 | 65321 | WalR | 6.81e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| EKBLOECO_206 | 6263 | 6066 | CspR | 4.14e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EKBLOECO_1 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_2 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_3 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_4 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_5 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_6 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_7 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_8 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_9 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_10 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_11 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_12 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_13 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_15 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_16 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_17 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_18 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_20 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_21 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_22 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_23 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_24 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_25 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_26 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_27 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_29 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_30 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_32 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_33 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_35 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_36 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_37 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_44 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_55 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_66 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_77 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_87 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_97 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_107 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_108 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_116 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_125 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_133 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_142 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_152 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_160 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_168 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_176 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_183 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_192 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_193 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_200 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_206 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_213 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_220 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_226 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_234 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_240 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_247 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_255 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_263 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_264 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_270 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_278 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_284 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_288 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_299 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_307 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_314 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_321 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_329 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_337 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_338 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_345 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_351 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_362 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_370 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_380 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_383 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_384 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_385 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_386 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_387 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_388 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_389 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_390 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_391 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_392 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_393 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_394 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_395 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_396 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_397 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_398 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_399 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_400 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_401 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_402 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_403 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_404 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_405 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_406 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_407 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_408 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_409 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_410 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_411 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_412 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_413 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_414 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_415 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_416 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_417 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_418 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_419 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_420 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_421 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_422 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_423 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_424 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_425 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_426 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_427 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_428 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_429 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_430 | 1.0 | 0.0 | 1.0 |
| EKBLOECO_431 | 0.0 | 1.0 | 0.0 |
| EKBLOECO_432 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EKBLOECO_176 | 1456 | 30849 | False | Siphoviridae | VOG9741, VOG0152, VOG4994, VOG3643, VOG6386, VOG0044, VOG2338, VOG0198, VOG4570, VOG3699, VOG4544, VOG0691, VOG0692, VOG5616, VOG1183, VOG4555, VOG4711, VOG0695, VOG0696, VOG0697, VOG0698, VOG5587, VOG5601, VOG9763, VOG0701, VOG4705, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054, VOG4918 |
| EKBLOECO_263 | 1081 | 5821 | False | Unknown | VOG6238, VOG4566, VOG0186, VOG1309, VOG1502, VOG8241, VOG6120 |
Phigaro v2.4.0 (Database: Jan. 2024 release)