Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MOOMOHEC_64 | 54928 | 55635 | WalR | 2.33e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| MOOMOHEC_4 | 26955 | 26758 | CspR | 7.31e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| MOOMOHEC_4 | 26955 | 26761 | CspA | 3.57e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MOOMOHEC_1 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_2 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_3 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_4 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_5 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_6 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_7 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_8 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_9 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_10 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_11 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_12 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_13 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_14 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_15 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_16 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_17 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_18 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_19 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_20 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_21 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_22 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_23 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_24 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_25 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_26 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_27 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_28 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_29 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_30 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_32 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_33 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_34 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_35 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_36 | 1.0 | 0.0 | 1.0 |
| MOOMOHEC_44 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_55 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_61 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_62 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_63 | 0.0 | 1.0 | 0.0 |
| MOOMOHEC_64 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MOOMOHEC_13 | 4913 | 18921 | False | Siphoviridae | VOG6163, VOG0817, VOG0725, VOG0799, VOG0704, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG4544, VOG3699 |
| MOOMOHEC_13 | 26336 | 30302 | False | Unknown | VOG0186, VOG1309, VOG4502, VOG2338, VOG4552 |
| MOOMOHEC_61 | 71920 | 96548 | False | Siphoviridae | VOG3947, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG9107, VOG0198, VOG4440, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG9583, VOG0207, VOG4586, VOG1125, VOG9629, VOG9258 |
Phigaro v2.4.0 (Database: Jan. 2024 release)