Probiotic potential risk score


ARGs VFs PGs PPRS
0022.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
MJJACNPF_476337062666WalR1.63e-112transcriptional regulatory protein83.40100.00EPH95667
MJJACNPF_421681517012CspR4.92e-34cold shock protein89.39100.00AAO82613

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
MJJACNPF_110.01.00.0
MJJACNPF_220.01.00.0
MJJACNPF_280.01.00.0
MJJACNPF_290.01.00.0
MJJACNPF_300.01.00.0
MJJACNPF_310.01.00.0
MJJACNPF_320.01.00.0
MJJACNPF_330.01.00.0
MJJACNPF_340.01.00.0
MJJACNPF_350.01.00.0
MJJACNPF_360.01.00.0
MJJACNPF_370.01.00.0
MJJACNPF_380.01.00.0
MJJACNPF_390.01.00.0
MJJACNPF_400.01.00.0
MJJACNPF_410.01.00.0
MJJACNPF_420.01.00.0
MJJACNPF_430.01.00.0
MJJACNPF_440.01.00.0
MJJACNPF_451.00.01.0
MJJACNPF_460.01.00.0
MJJACNPF_470.01.00.0
MJJACNPF_480.01.00.0
MJJACNPF_491.00.01.0
MJJACNPF_500.01.00.0
MJJACNPF_510.01.00.0
MJJACNPF_521.00.01.0
MJJACNPF_530.01.00.0
MJJACNPF_540.01.00.0
MJJACNPF_550.01.00.0
MJJACNPF_560.01.00.0
MJJACNPF_570.01.00.0
MJJACNPF_580.01.00.0
MJJACNPF_591.00.01.0
MJJACNPF_601.00.01.0
MJJACNPF_611.00.01.0
MJJACNPF_620.01.00.0
MJJACNPF_631.00.01.0
MJJACNPF_641.00.01.0
MJJACNPF_651.00.01.0
MJJACNPF_660.01.00.0
MJJACNPF_671.00.01.0
MJJACNPF_681.00.01.0
MJJACNPF_690.01.00.0
MJJACNPF_700.01.00.0
MJJACNPF_711.00.01.0
MJJACNPF_721.00.01.0
MJJACNPF_731.00.01.0
MJJACNPF_740.01.00.0
MJJACNPF_760.01.00.0
MJJACNPF_771.00.01.0
MJJACNPF_781.00.01.0
MJJACNPF_791.00.01.0
MJJACNPF_800.01.00.0
MJJACNPF_811.00.01.0
MJJACNPF_831.00.01.0
MJJACNPF_841.00.01.0
MJJACNPF_851.00.01.0
MJJACNPF_861.00.01.0
MJJACNPF_871.00.01.0
MJJACNPF_880.01.00.0
MJJACNPF_891.00.01.0
MJJACNPF_910.01.00.0
MJJACNPF_921.00.01.0
MJJACNPF_931.00.01.0
MJJACNPF_941.00.01.0
MJJACNPF_950.01.00.0
MJJACNPF_960.01.00.0
MJJACNPF_971.00.01.0
MJJACNPF_980.01.00.0
MJJACNPF_991.00.01.0
MJJACNPF_1001.00.01.0
MJJACNPF_1020.01.00.0
MJJACNPF_1130.01.00.0
MJJACNPF_1240.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
MJJACNPF_287657988725FalseSiphoviridaeVOG3304, VOG0862, VOG8520, VOG10059, VOG0181, VOG10867, VOG6450, VOG4967, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG5998, VOG6795, VOG5562
MJJACNPF_431931329444FalseSiphoviridaeVOG4602, VOG6495, VOG5353, VOG4552, VOG0181, VOG10867, VOG4600, VOG1309, VOG11003, VOG4566, VOG0189, VOG7363, VOG5998, VOG5562, VOG4693
MJJACNPF_47129305140054FalseSiphoviridaeVOG1581, VOG4632, VOG4606, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204
MJJACNPF_69155447156193FalseUnknown

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements