Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IBFGGKPD_372 | 37644 | 37841 | CspA | 2.41e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| IBFGGKPD_372 | 37644 | 37838 | CspR | 1.05e-27 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IBFGGKPD_11 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_22 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_33 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_44 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_55 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_66 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_77 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_88 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_99 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_110 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_111 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_122 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_133 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_144 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_155 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_166 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_177 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_188 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_199 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_210 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_221 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_222 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_233 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_244 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_255 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_266 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_277 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_288 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_299 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_310 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_321 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_332 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_333 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_344 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_352 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_353 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_354 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_355 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_356 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_357 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_358 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_359 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_360 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_361 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_362 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_363 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_364 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_365 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_366 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_367 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_368 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_369 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_370 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_371 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_372 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_373 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_375 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_376 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_377 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_378 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_379 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_380 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_381 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_382 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_383 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_384 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_385 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_386 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_387 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_388 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_389 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_390 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_391 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_392 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_393 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_394 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_395 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_396 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_397 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_398 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_399 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_400 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_401 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_402 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_403 | 1.0 | 0.0 | 1.0 |
| IBFGGKPD_404 | 0.0 | 1.0 | 0.0 |
| IBFGGKPD_415 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IBFGGKPD_111 | 92921 | 125718 | False | Siphoviridae | VOG2228, VOG1309, VOG0186, VOG0226, VOG0189, VOG0536, VOG0198, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG4553, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG9471, VOG6163, VOG0801, VOG3462, VOG10972, VOG9997, VOG4856, VOG10223, VOG8917, VOG9091, VOG0703 |
| IBFGGKPD_404 | 40523 | 49408 | False | Siphoviridae | VOG10457, VOG1176, VOG8295, VOG0025 |
Phigaro v2.4.0 (Database: Jan. 2024 release)