Probiotic potential risk score


ARGs VFs PGs PPRS
0022.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
BCLAHLHG_1109376110080WalR3.07e-114transcriptional regulatory protein84.25100.00EPH95667
BCLAHLHG_235744857254CspR1.36e-29cold shock protein84.6198.48AAO82613
BCLAHLHG_235744857251CspA2.08e-29cold shock protein84.85100.00CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
BCLAHLHG_241936rep28936 / 936100.00CP005948
BCLAHLHG_331957repUS64958 / 95492.69JN601038

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
BCLAHLHG_10.01.00.0
BCLAHLHG_20.01.00.0
BCLAHLHG_30.01.00.0
BCLAHLHG_40.01.00.0
BCLAHLHG_50.01.00.0
BCLAHLHG_60.01.00.0
BCLAHLHG_70.01.00.0
BCLAHLHG_80.01.00.0
BCLAHLHG_90.01.00.0
BCLAHLHG_100.01.00.0
BCLAHLHG_110.01.00.0
BCLAHLHG_120.01.00.0
BCLAHLHG_130.01.00.0
BCLAHLHG_140.01.00.0
BCLAHLHG_151.00.01.0
BCLAHLHG_160.01.00.0
BCLAHLHG_170.01.00.0
BCLAHLHG_180.01.00.0
BCLAHLHG_190.01.00.0
BCLAHLHG_201.00.01.0
BCLAHLHG_211.00.01.0
BCLAHLHG_221.00.01.0
BCLAHLHG_230.01.00.0
BCLAHLHG_241.00.01.0
BCLAHLHG_251.00.01.0
BCLAHLHG_261.00.01.0
BCLAHLHG_271.00.01.0
BCLAHLHG_280.01.00.0
BCLAHLHG_291.00.01.0
BCLAHLHG_311.00.01.0
BCLAHLHG_321.00.01.0
BCLAHLHG_331.00.01.0
BCLAHLHG_340.01.00.0
BCLAHLHG_351.00.01.0
BCLAHLHG_361.00.01.0
BCLAHLHG_370.01.00.0
BCLAHLHG_381.00.01.0
BCLAHLHG_391.00.01.0
BCLAHLHG_411.00.01.0
BCLAHLHG_421.00.01.0
BCLAHLHG_431.00.01.0
BCLAHLHG_441.00.01.0
BCLAHLHG_450.01.00.0
BCLAHLHG_461.00.01.0
BCLAHLHG_470.01.00.0
BCLAHLHG_560.01.00.0
BCLAHLHG_630.01.00.0
BCLAHLHG_640.01.00.0
BCLAHLHG_650.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
BCLAHLHG_21119020982FalseSiphoviridaeVOG9763, VOG6548, VOG0697, VOG0696, VOG0695, VOG4711, VOG9317, VOG0692, VOG0691, VOG0796
BCLAHLHG_22667132593FalseSiphoviridaeVOG4552, VOG4566, VOG0226, VOG0283, VOG0535, VOG1302, VOG0650
BCLAHLHG_13766837342FalseSiphoviridaeVOG0650, VOG0226, VOG4799, VOG0514, VOG5509, VOG5280, VOG5317, VOG4643, VOG0195, VOG0275, VOG4732, VOG8360, VOG4841, VOG4581, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG4910, VOG0801, VOG3462, VOG10223, VOG8438
BCLAHLHG_63632726171FalseSiphoviridaeVOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG0720, VOG4544, VOG0796, VOG0045, VOG0198

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements