Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BNHMAMPJ_13 | 58393 | 59097 | WalR | 1.49e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| BNHMAMPJ_19 | 14094 | 14291 | CspR | 3.95e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BNHMAMPJ_1 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_2 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_3 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_4 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_5 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_6 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_7 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_8 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_9 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_10 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_11 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_12 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_13 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_14 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_15 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_16 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_17 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_18 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_19 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_20 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_21 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_22 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_23 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_24 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_25 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_26 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_27 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_28 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_29 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_30 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_31 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_32 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_33 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_34 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_35 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_36 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_37 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_38 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_39 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_40 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_41 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_42 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_43 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_44 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_45 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_46 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_47 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_48 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_49 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_51 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_52 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_53 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_54 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_55 | 1.0 | 0.0 | 1.0 |
| BNHMAMPJ_56 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_57 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_58 | 0.0 | 1.0 | 0.0 |
| BNHMAMPJ_59 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BNHMAMPJ_11 | 16438 | 26506 | False | Siphoviridae | VOG4632, VOG4609, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204, VOG4589 |
| BNHMAMPJ_16 | 1669 | 32136 | False | Siphoviridae | VOG0703, VOG7017, VOG0861, VOG7896, VOG6455, VOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG4570, VOG0198, VOG3643, VOG3643, VOG0152, VOG4567, VOG0536, VOG9860, VOG0189, VOG4566, VOG0186, VOG1309, VOG8241 |
Phigaro v2.4.0 (Database: Jan. 2024 release)