Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FDHGIMLC_248 | 14376 | 14570 | CspA | 7.46e-29 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FDHGIMLC_148 | 522 | 1552 | repUS67 | 1046 / 1039 | 85.76 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FDHGIMLC_86 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_87 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_88 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_89 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_90 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_91 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_92 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_93 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_94 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_95 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_96 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_97 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_98 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_99 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_100 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_101 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_102 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_103 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_104 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_105 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_106 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_107 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_108 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_109 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_110 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_111 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_112 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_113 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_114 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_115 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_116 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_117 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_118 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_119 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_120 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_121 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_122 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_123 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_124 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_125 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_126 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_127 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_128 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_129 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_130 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_131 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_132 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_133 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_134 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_135 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_136 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_137 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_138 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_139 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_140 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_141 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_142 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_143 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_144 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_145 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_146 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_147 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_148 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_149 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_150 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_151 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_152 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_153 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_154 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_155 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_156 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_157 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_158 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_160 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_162 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_163 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_164 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_165 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_166 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_168 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_169 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_171 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_172 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_173 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_174 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_175 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_178 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_179 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_180 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_182 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_183 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_185 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_186 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_190 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_191 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_193 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_194 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_195 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_198 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_201 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_204 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_205 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_206 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_207 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_208 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_210 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_211 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_212 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_213 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_214 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_215 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_216 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_217 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_218 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_219 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_220 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_221 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_222 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_223 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_224 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_225 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_226 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_227 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_228 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_229 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_230 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_231 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_232 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_233 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_234 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_235 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_236 | 1.0 | 0.0 | 1.0 |
| FDHGIMLC_237 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_238 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_239 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_240 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_241 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_242 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_243 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_244 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_245 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_246 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_247 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_248 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_249 | 0.0 | 1.0 | 0.0 |
| FDHGIMLC_250 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FDHGIMLC_169 | 10020 | 19077 | False | Siphoviridae | VOG4999, VOG6414, VOG0205, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568 |
| FDHGIMLC_219 | 2708 | 35771 | False | Siphoviridae | VOG4856, VOG3462, VOG0801, VOG4545, VOG0725, VOG0799, VOG0724, VOG1353, VOG4713, VOG1329, VOG10901, VOG4564, VOG0720, VOG10227, VOG3699, VOG0376, VOG0198, VOG0686, VOG4552, VOG0536, VOG5133, VOG0189, VOG11060, VOG4566, VOG0514, VOG0226, VOG0322, VOG0535, VOG2335, VOG2228, VOG4552, VOG5063, VOG8520, VOG0862, VOG3304, VOG1638 |
Phigaro v2.4.0 (Database: Jan. 2024 release)