Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JHLLKODJ_46 | 8670 | 8864 | CspA | 6.01e-29 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JHLLKODJ_1 | 62031 | 63021 | repUS67 | 997 / 1039 | 90.07 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JHLLKODJ_1 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_2 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_3 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_4 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_5 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_6 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_7 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_8 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_9 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_10 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_11 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_12 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_13 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_14 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_15 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_16 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_17 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_18 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_19 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_20 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_21 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_22 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_23 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_24 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_25 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_26 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_27 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_28 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_29 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_30 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_31 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_32 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_33 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_34 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_35 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_36 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_37 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_38 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_39 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_40 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_41 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_42 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_43 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_44 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_45 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_46 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_47 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_48 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_49 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_50 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_51 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_52 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_54 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_55 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_56 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_57 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_58 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_59 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_60 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_61 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_62 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_63 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_64 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_65 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_66 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_67 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_68 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_69 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_70 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_71 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_72 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_73 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_74 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_75 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_76 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_77 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_79 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_80 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_81 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_82 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_83 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_84 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_85 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_86 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_87 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_88 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_89 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_90 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_91 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_92 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_93 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_94 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_95 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_96 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_97 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_98 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_99 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_100 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_101 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_102 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_103 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_106 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_107 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_108 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_112 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_113 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_124 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_135 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_146 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_157 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_168 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_179 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_190 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_201 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_212 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_214 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_215 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_216 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_217 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_218 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_219 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_220 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_221 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_222 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_223 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_224 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_225 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_226 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_227 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_228 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_229 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_230 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_231 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_232 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_233 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_234 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_235 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_236 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_237 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_238 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_239 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_240 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_241 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_242 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_243 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_244 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_245 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_246 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_247 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_248 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_249 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_250 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_251 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_252 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_253 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_254 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_255 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_256 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_257 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_258 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_259 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_260 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_261 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_262 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_263 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_264 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_265 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_266 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_267 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_268 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_269 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_270 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_271 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_272 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_273 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_274 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_275 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_276 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_277 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_278 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_279 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_280 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_281 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_282 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_283 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_284 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_285 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_286 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_287 | 0.0 | 1.0 | 0.0 |
| JHLLKODJ_288 | 1.0 | 0.0 | 1.0 |
| JHLLKODJ_289 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JHLLKODJ_1 | 5100 | 14789 | False | Siphoviridae | VOG0536, VOG0018, VOG0018, VOG1198, VOG5068, VOG4692 |
| JHLLKODJ_1 | 26360 | 58417 | False | Unknown | VOG10614, VOG0275, VOG0054, VOG0753, VOG0648, VOG9091, VOG10609, VOG4763, VOG5534, VOG7628, VOG7629, VOG6036, VOG6941, VOG6246, VOG6524, VOG6031, VOG5721, VOG10877, VOG5461, VOG4544, VOG5722 |
| JHLLKODJ_2 | 2172 | 31776 | False | Siphoviridae | VOG6163, VOG0083, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG1886, VOG5068, VOG4581, VOG4841, VOG7807, VOG0531, VOG10618, VOG0198, VOG6140, VOG3468, VOG4552, VOG0536, VOG8966, VOG6183, VOG0189, VOG8647, VOG0226, VOG0283, VOG9708, VOG5345, VOG2228, VOG4552, VOG5063, VOG8520, VOG0862, VOG5944 |
| JHLLKODJ_101 | 10881 | 20192 | False | Unknown | VOG0052, VOG7438, VOG1047, VOG0021, VOG0026, VOG4606 |
| JHLLKODJ_113 | 7325 | 15819 | False | Unknown | VOG0377, VOG5757, VOG0025, VOG7627, VOG4570 |
| JHLLKODJ_268 | 4710 | 15860 | True | Siphoviridae | VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641, VOG0221, VOG0221, VOG5413 |
Phigaro v2.4.0 (Database: Jan. 2024 release)