Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JHBJDKLC_214 | 20001 | 19807 | CspA | 5.99e-29 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JHBJDKLC_256 | 21319 | 22349 | repUS67 | 1047 / 1039 | 85.00 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JHBJDKLC_60 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_62 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_63 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_64 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_65 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_66 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_67 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_68 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_69 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_70 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_71 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_72 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_73 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_74 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_75 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_76 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_77 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_78 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_79 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_80 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_81 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_82 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_83 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_84 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_85 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_86 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_87 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_88 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_89 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_90 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_91 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_92 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_93 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_94 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_95 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_96 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_97 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_98 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_99 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_100 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_101 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_102 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_103 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_104 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_105 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_106 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_107 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_108 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_109 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_110 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_111 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_112 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_113 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_114 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_115 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_116 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_117 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_118 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_119 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_120 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_121 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_122 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_123 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_124 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_125 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_126 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_127 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_128 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_129 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_130 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_131 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_132 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_133 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_134 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_135 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_136 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_137 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_138 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_139 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_140 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_141 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_142 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_143 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_144 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_145 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_146 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_147 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_148 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_149 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_150 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_151 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_152 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_153 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_154 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_155 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_156 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_157 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_158 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_159 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_160 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_161 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_162 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_163 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_164 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_165 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_166 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_167 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_168 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_169 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_170 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_171 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_172 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_173 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_174 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_175 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_176 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_177 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_178 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_179 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_180 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_181 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_182 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_183 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_184 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_185 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_186 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_187 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_188 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_189 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_190 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_191 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_192 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_193 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_194 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_195 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_196 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_197 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_198 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_199 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_200 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_201 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_202 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_203 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_204 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_205 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_207 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_212 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_213 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_214 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_216 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_217 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_218 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_219 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_220 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_221 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_222 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_223 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_224 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_225 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_226 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_227 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_228 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_229 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_230 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_231 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_232 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_233 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_234 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_235 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_236 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_237 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_238 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_239 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_240 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_241 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_242 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_243 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_244 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_245 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_246 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_247 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_248 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_249 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_250 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_251 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_252 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_253 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_254 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_255 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_256 | 1.0 | 0.0 | 1.0 |
| JHBJDKLC_257 | 0.0 | 1.0 | 0.0 |
| JHBJDKLC_258 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JHBJDKLC_245 | 3611 | 33324 | False | Siphoviridae | VOG0801, VOG0083, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG1886, VOG5068, VOG4581, VOG4841, VOG7807, VOG0531, VOG10618, VOG0198, VOG6140, VOG3468, VOG4552, VOG0536, VOG8966, VOG6183, VOG0189, VOG8647, VOG0226, VOG0283, VOG9708, VOG5345, VOG2228, VOG4552, VOG5063, VOG8520, VOG0862 |
| JHBJDKLC_254 | 34922 | 62079 | False | Siphoviridae | VOG0275, VOG8246, VOG0822, VOG11003, VOG0083, VOG0052, VOG7438, VOG1047, VOG0021, VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG4581, VOG4571, VOG0274, VOG4544, VOG4556, VOG4573, VOG4553 |
Phigaro v2.4.0 (Database: Jan. 2024 release)