Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MOCHDPGB_215 | 14393 | 14587 | CspA | 7.46e-29 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MOCHDPGB_138 | 13870 | 14900 | repUS67 | 1046 / 1039 | 85.76 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MOCHDPGB_61 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_62 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_63 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_64 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_66 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_67 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_69 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_70 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_71 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_72 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_73 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_74 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_75 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_76 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_77 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_78 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_79 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_80 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_81 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_82 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_83 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_84 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_85 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_86 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_87 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_88 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_89 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_90 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_91 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_92 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_93 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_94 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_95 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_96 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_97 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_98 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_99 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_100 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_101 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_102 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_103 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_104 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_105 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_106 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_107 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_108 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_109 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_110 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_111 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_112 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_113 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_114 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_115 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_116 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_117 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_118 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_119 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_120 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_121 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_122 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_123 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_124 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_125 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_126 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_127 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_128 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_129 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_130 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_131 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_132 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_133 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_134 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_135 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_136 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_137 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_138 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_139 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_140 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_141 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_142 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_144 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_146 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_147 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_148 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_149 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_150 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_151 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_154 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_156 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_157 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_158 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_159 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_160 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_161 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_162 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_165 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_166 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_169 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_170 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_171 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_172 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_173 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_175 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_176 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_177 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_178 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_179 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_181 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_182 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_183 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_184 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_185 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_186 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_187 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_188 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_189 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_190 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_191 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_192 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_193 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_194 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_195 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_196 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_197 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_198 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_199 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_200 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_201 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_202 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_203 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_204 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_205 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_206 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_207 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_208 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_209 | 1.0 | 0.0 | 1.0 |
| MOCHDPGB_210 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_211 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_212 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_213 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_214 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_215 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_216 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_217 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_218 | 0.0 | 1.0 | 0.0 |
| MOCHDPGB_219 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MOCHDPGB_136 | 2145 | 30153 | False | Siphoviridae | VOG5601, VOG4856, VOG3462, VOG0801, VOG4545, VOG0725, VOG0799, VOG0724, VOG1353, VOG4713, VOG1329, VOG10901, VOG4564, VOG0720, VOG10227, VOG3699, VOG0376, VOG0376, VOG0198, VOG0686, VOG4552, VOG0536, VOG5133, VOG0189, VOG4566, VOG0514 |
| MOCHDPGB_144 | 10021 | 19078 | False | Siphoviridae | VOG4999, VOG6414, VOG0205, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568 |
Phigaro v2.4.0 (Database: Jan. 2024 release)