Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GILHAPMK_1 | 21280 | 21086 | CspA | 1.68e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GILHAPMK_1 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_2 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_3 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_4 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_5 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_6 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_7 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_8 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_9 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_10 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_11 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_12 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_13 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_14 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_15 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_16 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_17 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_18 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_19 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_20 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_21 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_22 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_23 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_24 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_25 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_26 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_27 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_28 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_29 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_30 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_31 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_32 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_34 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_35 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_36 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_37 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_38 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_39 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_40 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_42 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_43 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_44 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_45 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_46 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_48 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_49 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_50 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_51 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_52 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_53 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_54 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_55 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_56 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_57 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_59 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_60 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_61 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_62 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_63 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_64 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_65 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_66 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_67 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_68 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_69 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_70 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_79 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_90 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_101 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_112 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_113 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_124 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_130 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_131 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_132 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_133 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_134 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_135 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_136 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_137 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_138 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_139 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_140 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_141 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_142 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_143 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_144 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_145 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_146 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_147 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_148 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_149 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_150 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_151 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_152 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_153 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_154 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_155 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_156 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_157 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_158 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_159 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_160 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_161 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_162 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_163 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_164 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_165 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_166 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_167 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_168 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_169 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_170 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_171 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_172 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_173 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_174 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_175 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_176 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_177 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_178 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_179 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_180 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_181 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_182 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_183 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_184 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_185 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_186 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_187 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_188 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_189 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_190 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_191 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_192 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_193 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_194 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_195 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_196 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_197 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_198 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_199 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_200 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_201 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_202 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_203 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_204 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_205 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_206 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_207 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_208 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_209 | 1.0 | 0.0 | 1.0 |
| GILHAPMK_210 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_211 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_212 | 0.0 | 1.0 | 0.0 |
| GILHAPMK_213 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GILHAPMK_68 | 2359 | 25222 | False | Siphoviridae | VOG0198, VOG3477, VOG3699, VOG10227, VOG0691, VOG0692, VOG4555, VOG4572, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG4545, VOG0801, VOG4619, VOG10972, VOG4683, VOG8134 |
| GILHAPMK_160 | 6435 | 40932 | False | Siphoviridae | VOG8426, VOG4881, VOG2228, VOG5420, VOG9708, VOG0283, VOG0226, VOG8647, VOG0189, VOG0536, VOG3307, VOG9500, VOG0198, VOG7639, VOG8600, VOG0376, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG10819, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997, VOG4626 |
Phigaro v2.4.0 (Database: Jan. 2024 release)