Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CPIJKKOE_1 | 21280 | 21086 | CspA | 1.68e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CPIJKKOE_1 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_2 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_3 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_4 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_5 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_6 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_7 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_8 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_9 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_10 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_11 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_12 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_13 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_14 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_15 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_16 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_17 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_18 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_19 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_20 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_21 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_22 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_23 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_24 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_25 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_26 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_27 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_28 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_30 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_31 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_32 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_33 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_34 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_35 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_36 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_37 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_38 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_39 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_40 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_41 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_42 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_43 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_45 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_46 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_47 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_48 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_49 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_50 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_51 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_52 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_54 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_55 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_56 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_57 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_58 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_59 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_60 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_61 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_62 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_63 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_64 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_65 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_67 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_68 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_69 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_70 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_71 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_72 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_73 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_74 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_75 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_76 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_77 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_78 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_79 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_90 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_101 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_112 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_113 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_124 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_135 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_146 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_157 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_165 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_166 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_167 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_168 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_169 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_170 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_171 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_172 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_173 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_174 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_175 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_176 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_177 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_178 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_179 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_180 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_181 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_182 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_183 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_184 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_185 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_186 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_187 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_188 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_189 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_190 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_191 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_192 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_193 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_194 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_195 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_196 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_197 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_198 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_199 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_200 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_201 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_202 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_203 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_204 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_205 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_206 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_207 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_208 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_209 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_210 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_211 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_212 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_213 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_214 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_215 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_216 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_217 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_218 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_219 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_220 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_221 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_222 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_223 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_224 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_225 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_226 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_227 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_228 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_229 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_230 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_231 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_232 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_233 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_234 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_235 | 1.0 | 0.0 | 1.0 |
| CPIJKKOE_236 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_237 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_238 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_239 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_240 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_241 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_242 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_243 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_244 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_245 | 0.0 | 1.0 | 0.0 |
| CPIJKKOE_246 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CPIJKKOE_146 | 10314 | 19001 | False | Siphoviridae | VOG0704, VOG4713, VOG4711, VOG4555, VOG4564, VOG0720, VOG4544 |
| CPIJKKOE_192 | 7001 | 41949 | False | Siphoviridae | VOG8426, VOG4881, VOG2228, VOG5420, VOG9708, VOG0283, VOG0226, VOG8647, VOG0189, VOG0536, VOG3307, VOG9500, VOG0198, VOG7639, VOG8600, VOG0376, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG10819, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997, VOG4626 |
Phigaro v2.4.0 (Database: Jan. 2024 release)