Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| POJKAGEG_125 | 2062 | 2256 | CspA | 4.88e-29 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| POJKAGEG_141 | 13695 | 14725 | repUS67 | 1046 / 1039 | 85.76 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| POJKAGEG_1 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_2 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_3 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_4 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_5 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_6 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_7 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_8 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_9 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_10 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_11 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_12 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_13 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_14 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_15 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_16 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_17 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_18 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_19 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_20 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_21 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_22 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_23 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_24 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_25 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_26 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_28 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_29 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_30 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_31 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_32 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_33 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_34 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_35 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_36 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_37 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_38 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_39 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_40 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_41 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_42 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_43 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_44 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_45 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_46 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_47 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_48 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_49 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_51 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_52 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_53 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_54 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_56 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_57 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_58 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_59 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_60 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_61 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_62 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_68 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_79 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_90 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_100 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_111 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_112 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_122 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_123 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_124 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_125 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_126 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_127 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_128 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_129 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_130 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_131 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_132 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_133 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_134 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_135 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_136 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_137 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_138 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_139 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_140 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_141 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_142 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_143 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_144 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_145 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_146 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_147 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_148 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_149 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_150 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_151 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_152 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_153 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_154 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_155 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_156 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_157 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_158 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_159 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_160 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_161 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_162 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_163 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_164 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_165 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_166 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_167 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_168 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_169 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_170 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_171 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_172 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_173 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_174 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_175 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_176 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_177 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_178 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_179 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_180 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_181 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_182 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_183 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_184 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_185 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_186 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_187 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_188 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_189 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_190 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_191 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_192 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_193 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_194 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_195 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_196 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_197 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_198 | 1.0 | 0.0 | 1.0 |
| POJKAGEG_199 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_200 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_201 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_202 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_203 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_204 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_205 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_206 | 0.0 | 1.0 | 0.0 |
| POJKAGEG_207 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| POJKAGEG_2 | 3138 | 37887 | False | Siphoviridae | VOG8559, VOG0774, VOG1638, VOG3304, VOG0862, VOG8520, VOG5063, VOG4552, VOG2228, VOG2335, VOG0535, VOG0322, VOG0226, VOG0514, VOG4566, VOG11060, VOG0189, VOG5133, VOG0536, VOG4552, VOG0686, VOG0198, VOG0376, VOG3699, VOG10227, VOG0720, VOG4564, VOG10901, VOG1329, VOG4713, VOG1353, VOG0724, VOG0799, VOG0725, VOG4545, VOG0801, VOG3462, VOG4856 |
| POJKAGEG_128 | 9984 | 19041 | False | Siphoviridae | VOG4999, VOG6414, VOG0205, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568 |
Phigaro v2.4.0 (Database: Jan. 2024 release)