Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NBNEAFNA_1 | 21280 | 21086 | CspA | 1.68e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NBNEAFNA_1 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_2 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_3 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_4 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_5 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_6 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_7 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_8 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_9 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_10 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_11 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_12 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_13 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_14 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_15 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_16 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_17 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_18 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_19 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_20 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_21 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_22 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_23 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_24 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_25 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_26 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_27 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_28 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_29 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_30 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_31 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_32 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_33 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_34 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_35 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_37 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_38 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_39 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_40 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_41 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_42 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_43 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_44 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_46 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_47 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_48 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_49 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_50 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_51 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_52 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_53 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_55 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_56 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_57 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_58 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_59 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_60 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_61 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_62 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_63 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_64 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_65 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_66 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_68 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_69 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_70 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_71 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_72 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_73 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_74 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_75 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_76 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_77 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_78 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_79 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_80 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_81 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_90 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_101 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_112 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_113 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_123 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_133 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_144 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_155 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_166 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_173 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_174 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_175 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_176 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_177 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_178 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_179 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_180 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_181 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_182 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_183 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_184 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_185 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_186 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_187 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_188 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_189 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_190 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_191 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_192 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_193 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_194 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_195 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_196 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_197 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_198 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_199 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_200 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_201 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_202 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_203 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_204 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_205 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_206 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_207 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_208 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_209 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_210 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_211 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_212 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_213 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_214 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_215 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_216 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_217 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_218 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_219 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_220 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_221 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_222 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_223 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_224 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_225 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_226 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_227 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_228 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_229 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_230 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_231 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_232 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_233 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_234 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_235 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_236 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_237 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_238 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_239 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_240 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_241 | 1.0 | 0.0 | 1.0 |
| NBNEAFNA_242 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_243 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_244 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_245 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_246 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_247 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_248 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_249 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_250 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_251 | 0.0 | 1.0 | 0.0 |
| NBNEAFNA_252 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NBNEAFNA_144 | 10314 | 19001 | False | Siphoviridae | VOG0704, VOG4713, VOG4711, VOG4555, VOG4564, VOG0720, VOG4544 |
| NBNEAFNA_199 | 6965 | 41936 | False | Siphoviridae | VOG8426, VOG4881, VOG2228, VOG5420, VOG9708, VOG0283, VOG0226, VOG8647, VOG0189, VOG0536, VOG3307, VOG9500, VOG0198, VOG7639, VOG8600, VOG0376, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG10819, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997, VOG4626 |
Phigaro v2.4.0 (Database: Jan. 2024 release)