Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LHAPMBCL_206 | 21226 | 21032 | CspA | 1.68e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LHAPMBCL_1 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_2 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_3 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_4 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_5 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_6 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_7 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_8 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_9 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_10 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_11 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_12 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_13 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_14 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_78 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_79 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_80 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_81 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_82 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_83 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_84 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_85 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_86 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_87 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_88 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_89 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_90 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_91 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_92 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_93 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_94 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_95 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_96 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_97 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_98 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_99 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_100 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_101 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_102 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_103 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_104 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_105 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_106 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_107 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_108 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_109 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_110 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_111 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_112 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_113 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_114 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_115 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_116 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_117 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_118 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_119 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_120 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_121 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_122 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_123 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_124 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_125 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_126 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_127 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_128 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_129 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_130 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_131 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_132 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_133 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_134 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_135 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_136 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_137 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_138 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_139 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_140 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_141 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_142 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_143 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_144 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_145 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_146 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_147 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_148 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_149 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_150 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_151 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_152 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_153 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_154 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_155 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_156 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_157 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_158 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_159 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_160 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_161 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_163 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_164 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_165 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_166 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_167 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_168 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_169 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_170 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_171 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_173 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_174 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_175 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_177 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_178 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_179 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_180 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_181 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_182 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_183 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_184 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_185 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_186 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_187 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_188 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_189 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_190 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_192 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_193 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_194 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_196 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_197 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_198 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_199 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_200 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_201 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_202 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_203 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_204 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_205 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_206 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_207 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_208 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_209 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_210 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_211 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_212 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_213 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_214 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_215 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_216 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_217 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_218 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_219 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_220 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_221 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_222 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_223 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_224 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_225 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_226 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_227 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_229 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_230 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_231 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_232 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_233 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_234 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_235 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_236 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_237 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_238 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_239 | 1.0 | 0.0 | 1.0 |
| LHAPMBCL_240 | 0.0 | 1.0 | 0.0 |
| LHAPMBCL_241 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LHAPMBCL_166 | 4406 | 28338 | False | Siphoviridae | VOG8600, VOG0376, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG10819, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997, VOG4626 |
| LHAPMBCL_181 | 9257 | 18850 | False | Siphoviridae | VOG0725, VOG0704, VOG4713, VOG4711, VOG4555, VOG4564, VOG0720, VOG4544 |
Phigaro v2.4.0 (Database: Jan. 2024 release)