Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NIJNDOGC_1 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_2 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_3 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_4 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_5 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_6 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_7 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_8 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_9 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_10 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_11 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_12 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_13 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_14 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_15 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_16 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_17 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_18 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_19 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_20 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_21 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_22 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_23 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_24 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_25 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_26 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_27 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_28 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_29 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_30 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_31 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_32 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_33 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_34 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_35 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_36 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_37 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_38 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_39 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_40 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_41 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_42 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_43 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_44 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_45 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_46 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_47 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_48 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_49 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_50 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_51 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_52 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_54 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_55 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_57 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_68 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_79 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_88 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_97 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_107 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_108 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_109 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_110 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_111 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_112 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_113 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_114 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_115 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_116 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_117 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_118 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_119 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_120 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_121 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_122 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_123 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_124 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_125 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_126 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_127 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_128 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_129 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_130 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_131 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_132 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_133 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_134 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_135 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_136 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_137 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_138 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_139 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_140 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_141 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_142 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_143 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_144 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_145 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_146 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_147 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_148 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_149 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_150 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_151 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_152 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_153 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_154 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_155 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_156 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_157 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_158 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_159 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_160 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_161 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_162 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_163 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_164 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_165 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_166 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_167 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_168 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_169 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_170 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_171 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_172 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_173 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_174 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_175 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_176 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_177 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_178 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_179 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_180 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_181 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_182 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_183 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_184 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_185 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_186 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_187 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_188 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_189 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_190 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_191 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_192 | 0.0 | 1.0 | 0.0 |
| NIJNDOGC_193 | 1.0 | 0.0 | 1.0 |
| NIJNDOGC_194 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NIJNDOGC_88 | 6514 | 25711 | False | Myoviridae / Siphoviridae | VOG0322, VOG4548, VOG0226, VOG4606, VOG4966, VOG9300, VOG4677, VOG0327, VOG3349, VOG6005, VOG0198, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG4572, VOG4623, VOG3888, VOG1900, VOG4870, VOG5612 |
Phigaro v2.4.0 (Database: Jan. 2024 release)