Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NGBEDICE_111 | 13440 | 14288 | rep38 | 851 / 1104 | 87.07 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NGBEDICE_1 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_2 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_3 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_4 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_5 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_6 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_7 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_8 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_9 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_10 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_11 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_12 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_13 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_14 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_15 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_16 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_17 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_18 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_19 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_20 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_21 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_22 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_23 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_24 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_25 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_26 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_27 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_28 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_29 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_30 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_31 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_32 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_34 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_35 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_36 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_37 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_38 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_39 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_46 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_56 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_67 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_78 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_87 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_94 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_102 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_103 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_104 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_105 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_106 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_107 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_108 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_109 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_110 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_111 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_112 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_113 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_114 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_115 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_116 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_117 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_118 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_119 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_120 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_121 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_122 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_123 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_124 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_125 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_126 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_127 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_128 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_129 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_130 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_131 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_132 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_133 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_134 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_135 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_136 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_137 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_138 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_139 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_140 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_141 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_142 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_143 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_144 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_145 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_146 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_147 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_148 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_149 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_150 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_151 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_152 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_153 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_154 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_155 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_156 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_157 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_158 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_159 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_160 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_161 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_162 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_163 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_164 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_165 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_166 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_167 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_168 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_169 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_170 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_171 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_172 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_173 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_174 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_175 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_176 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_177 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_178 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_179 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_181 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_182 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_183 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_184 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_185 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_186 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_187 | 1.0 | 0.0 | 1.0 |
| NGBEDICE_188 | 0.0 | 1.0 | 0.0 |
| NGBEDICE_189 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NGBEDICE_110 | 2292 | 23618 | False | Myoviridae | VOG0861, VOG4705, VOG9945, VOG5215, VOG4862, VOG4691, VOG4550, VOG3894, VOG4885, VOG4865, VOG5793, VOG3892, VOG3891, VOG3890, VOG5612, VOG4870, VOG1900, VOG3888, VOG4623, VOG4572, VOG4555, VOG4564, VOG0720 |
Phigaro v2.4.0 (Database: Jan. 2024 release)