Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ECJCDOOP_1 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_2 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_3 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_4 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_5 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_6 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_8 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_9 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_10 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_11 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_12 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_13 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_14 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_15 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_16 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_17 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_18 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_19 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_20 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_21 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_22 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_23 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_33 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_44 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_53 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_61 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_67 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_71 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_72 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_73 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_74 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_75 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_76 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_77 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_78 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_79 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_80 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_81 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_82 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_83 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_84 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_85 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_86 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_87 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_88 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_89 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_90 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_91 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_92 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_93 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_94 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_95 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_96 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_97 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_98 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_99 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_100 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_101 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_102 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_103 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_104 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_105 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_106 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_107 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_108 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_109 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_110 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_111 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_112 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_113 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_114 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_115 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_116 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_117 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_118 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_119 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_120 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_121 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_122 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_123 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_124 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_125 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_126 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_127 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_128 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_129 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_130 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_131 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_132 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_133 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_134 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_135 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_136 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_137 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_138 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_139 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_140 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_141 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_142 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_143 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_144 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_145 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_146 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_147 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_148 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_150 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_151 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_152 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_153 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_154 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_155 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_156 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_157 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_158 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_159 | 1.0 | 0.0 | 1.0 |
| ECJCDOOP_160 | 0.0 | 1.0 | 0.0 |
| ECJCDOOP_161 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ECJCDOOP_76 | 13641 | 24089 | False | Unknown | VOG2987, |
| ECJCDOOP_82 | 5303 | 29245 | False | Myoviridae | VOG0979, |
| ECJCDOOP_82 | 40061 | 49968 | False | Myoviridae | VOG5235, |
| ECJCDOOP_83 | 3541 | 7283 | False | Unknown | VOG7643, |
| ECJCDOOP_83 | 14331 | 38240 | False | Myoviridae | VOG0403, |
| ECJCDOOP_92 | 5796 | 33895 | False | Myoviridae | VOG0054, |
| ECJCDOOP_104 | 4667 | 10918 | False | Siphoviridae | VOG4003, |
Phigaro v2.4.0 (Database: Jan. 2024 release)