Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JDFNHJKK_99 | 13335 | 13535 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JDFNHJKK_1 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_2 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_3 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_4 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_5 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_6 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_7 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_8 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_9 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_10 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_11 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_12 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_13 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_14 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_15 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_16 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_18 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_19 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_20 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_22 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_33 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_39 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_45 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_49 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_55 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_57 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_60 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_61 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_62 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_63 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_64 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_65 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_66 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_67 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_68 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_69 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_70 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_71 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_72 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_73 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_74 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_75 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_76 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_77 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_78 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_79 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_80 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_81 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_82 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_83 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_84 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_85 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_86 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_87 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_88 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_89 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_90 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_91 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_92 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_93 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_94 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_95 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_96 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_97 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_98 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_99 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_100 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_101 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_102 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_103 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_104 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_105 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_106 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_107 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_108 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_109 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_110 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_111 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_112 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_113 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_114 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_115 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_116 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_117 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_118 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_119 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_120 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_121 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_122 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_123 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_124 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_125 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_126 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_127 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_128 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_129 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_130 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_131 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_132 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_133 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_134 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_135 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_136 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_137 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_138 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_139 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_141 | 0.0 | 1.0 | 0.0 |
| JDFNHJKK_142 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_143 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_144 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_146 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_147 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_148 | 1.0 | 0.0 | 1.0 |
| JDFNHJKK_149 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JDFNHJKK_84 | 38799 | 51913 | False | Siphoviridae | VOG0796, |
| JDFNHJKK_117 | 75926 | 100048 | False | Siphoviridae | VOG1893, |
Phigaro v2.4.0 (Database: Jan. 2024 release)