Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NEMGPHMC_22 | 1650 | 2123 | dfrF | ARO:3002867 | dfrF | 100.00 | 95.73 | AF028812.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NEMGPHMC_22 | 1656 | 2123 | dfrF | trimethoprim-resistant dihydrofolate reductase DfrF | BLASTX | 100.00 | 95.12 | WP_002322211.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NEMGPHMC_1 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_2 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_3 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_4 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_5 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_6 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_7 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_8 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_9 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_10 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_11 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_12 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_13 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_14 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_15 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_16 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_17 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_18 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_19 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_20 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_21 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_22 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_23 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_24 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_25 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_26 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_27 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_28 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_29 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_30 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_31 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_32 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_33 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_34 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_35 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_36 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_37 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_38 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_39 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_40 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_41 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_42 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_43 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_44 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_45 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_46 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_47 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_48 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_49 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_50 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_51 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_52 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_53 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_54 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_55 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_56 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_57 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_58 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_59 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_60 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_61 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_62 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_63 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_64 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_65 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_66 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_67 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_68 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_69 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_70 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_71 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_72 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_73 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_74 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_75 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_76 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_77 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_78 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_79 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_81 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_82 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_83 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_84 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_85 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_86 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_87 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_88 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_89 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_90 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_91 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_92 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_93 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_94 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_95 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_96 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_97 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_98 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_99 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_100 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_101 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_102 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_103 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_104 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_105 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_106 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_107 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_108 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_109 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_110 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_111 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_112 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_113 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_114 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_115 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_116 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_117 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_118 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_119 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_120 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_121 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_122 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_123 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_124 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_125 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_126 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_127 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_128 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_129 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_130 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_131 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_132 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_133 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_134 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_135 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_136 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_137 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_138 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_139 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_140 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_141 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_142 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_143 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_144 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_145 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_146 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_147 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_148 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_149 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_150 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_151 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_152 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_153 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_154 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_155 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_156 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_157 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_158 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_159 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_161 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_162 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_164 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_165 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_166 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_167 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_168 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_169 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_171 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_181 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_189 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_197 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_205 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_206 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_212 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_215 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_221 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_225 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_227 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_231 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_236 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_239 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_242 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_244 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_245 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_246 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_252 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_256 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_260 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_261 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_262 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_263 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_264 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_265 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_266 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_267 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_268 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_269 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_270 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_271 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_272 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_273 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_274 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_275 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_276 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_277 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_278 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_279 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_280 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_281 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_282 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_283 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_284 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_285 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_286 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_287 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_288 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_289 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_290 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_291 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_292 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_293 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_294 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_295 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_296 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_297 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_298 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_299 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_300 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_301 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_302 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_303 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_304 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_305 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_306 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_307 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_308 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_309 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_310 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_311 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_312 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_313 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_314 | 1.0 | 0.0 | 1.0 |
| NEMGPHMC_315 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_316 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_317 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_318 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_319 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_320 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_321 | 0.0 | 1.0 | 0.0 |
| NEMGPHMC_322 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NEMGPHMC_109 | 12137 | 42743 | False | Siphoviridae | VOG4602, |
| NEMGPHMC_109 | 46161 | 84154 | True | Siphoviridae | VOG8302, |
Phigaro v2.4.0 (Database: Jan. 2024 release)