Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IGJPLFPF_35 | 534 | 2450 | tet(O) | ARO:3000190 | tet(O) | 98.28 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IGJPLFPF_35 | 534 | 2452 | tet(O) | Doxycycline, Tetracycline, Minocycline | 100.00 | 99.95 | Y07780 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IGJPLFPF_35 | 534 | 2450 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | EXACTX | 100.00 | 100.00 | WP_000691759.1 |
| IGJPLFPF_190 | 15429 | 15629 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IGJPLFPF_1 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_2 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_3 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_4 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_5 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_6 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_7 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_8 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_9 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_10 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_11 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_12 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_13 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_14 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_15 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_16 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_18 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_19 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_20 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_21 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_22 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_23 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_24 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_25 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_26 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_27 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_28 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_29 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_30 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_31 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_32 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_33 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_35 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_36 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_37 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_39 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_40 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_41 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_42 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_43 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_44 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_45 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_46 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_47 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_48 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_49 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_50 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_51 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_52 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_53 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_54 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_57 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_58 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_59 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_60 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_61 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_62 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_63 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_64 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_65 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_66 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_67 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_68 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_69 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_70 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_71 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_72 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_73 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_74 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_76 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_77 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_78 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_79 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_80 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_81 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_82 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_84 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_85 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_86 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_87 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_88 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_98 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_109 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_110 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_121 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_131 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_142 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_151 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_159 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_160 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_161 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_162 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_163 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_164 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_165 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_166 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_167 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_168 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_169 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_170 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_171 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_172 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_173 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_174 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_175 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_176 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_177 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_178 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_179 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_180 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_181 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_182 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_183 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_184 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_185 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_186 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_187 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_188 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_189 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_190 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_191 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_192 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_193 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_194 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_195 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_196 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_197 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_198 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_199 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_200 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_201 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_202 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_203 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_204 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_205 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_206 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_207 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_208 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_209 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_210 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_211 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_212 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_213 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_214 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_215 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_216 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_217 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_218 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_219 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_220 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_221 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_222 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_223 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_224 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_225 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_226 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_227 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_228 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_229 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_230 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_231 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_232 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_233 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_234 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_235 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_236 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_237 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_238 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_239 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_240 | 1.0 | 0.0 | 1.0 |
| IGJPLFPF_241 | 0.0 | 1.0 | 0.0 |
| IGJPLFPF_242 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IGJPLFPF_198 | 74329 | 87855 | False | Siphoviridae | VOG0198, |
Phigaro v2.4.0 (Database: Jan. 2024 release)