Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PLNEKKBH_30 | 534 | 2450 | tet(O) | ARO:3000190 | tet(O) | 98.28 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PLNEKKBH_30 | 534 | 2452 | tet(O) | Doxycycline, Tetracycline, Minocycline | 100.00 | 99.95 | Y07780 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PLNEKKBH_30 | 534 | 2450 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | EXACTX | 100.00 | 100.00 | WP_000691759.1 |
| PLNEKKBH_198 | 15429 | 15629 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PLNEKKBH_1 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_2 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_3 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_4 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_5 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_6 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_7 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_8 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_9 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_10 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_11 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_12 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_13 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_15 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_16 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_17 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_18 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_19 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_20 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_21 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_22 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_23 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_24 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_25 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_26 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_27 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_28 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_29 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_30 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_32 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_33 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_34 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_36 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_37 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_38 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_39 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_40 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_41 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_42 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_43 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_44 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_45 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_46 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_47 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_48 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_49 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_50 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_52 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_53 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_54 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_55 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_57 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_58 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_59 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_60 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_61 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_62 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_63 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_64 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_65 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_66 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_67 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_68 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_69 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_70 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_72 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_73 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_74 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_75 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_76 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_77 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_79 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_80 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_81 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_82 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_83 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_87 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_96 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_107 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_108 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_119 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_128 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_138 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_145 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_154 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_163 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_167 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_168 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_169 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_170 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_171 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_172 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_173 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_174 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_175 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_176 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_177 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_178 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_179 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_180 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_181 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_182 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_183 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_184 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_185 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_186 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_187 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_188 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_189 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_190 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_191 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_192 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_193 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_194 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_195 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_196 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_197 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_198 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_199 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_200 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_201 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_202 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_203 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_204 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_205 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_206 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_207 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_208 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_209 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_210 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_211 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_212 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_213 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_214 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_215 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_216 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_217 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_218 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_219 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_220 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_221 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_222 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_223 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_224 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_225 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_226 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_227 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_228 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_229 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_230 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_231 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_232 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_233 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_234 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_235 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_236 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_237 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_238 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_239 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_240 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_241 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_242 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_243 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_244 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_245 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_246 | 0.0 | 1.0 | 0.0 |
| PLNEKKBH_247 | 1.0 | 0.0 | 1.0 |
| PLNEKKBH_248 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PLNEKKBH_204 | 74329 | 87855 | False | Siphoviridae | VOG0198, |
Phigaro v2.4.0 (Database: Jan. 2024 release)