Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HHJFGIKK_44 | 13317 | 15236 | tet(W) | ARO:3000194 | tet(W) | 100.00 | 100.00 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HHJFGIKK_44 | 13317 | 15236 | tet(W) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | AJ427422 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HHJFGIKK_44 | 13320 | 15236 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | EXACTX | 100.00 | 100.00 | WP_002586627.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HHJFGIKK_1 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_2 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_3 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_4 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_6 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_7 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_9 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_10 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_11 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_12 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_13 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_22 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_33 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_44 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_55 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_61 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_62 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_63 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_64 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_65 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_66 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_67 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_68 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_69 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_70 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_71 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_72 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_73 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_74 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_75 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_76 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_77 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_78 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_79 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_80 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_81 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_82 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_83 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_84 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_85 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_86 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_87 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_88 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_89 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_90 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_91 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_92 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_93 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_94 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_95 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_96 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_97 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_98 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_99 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_100 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_101 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_102 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_103 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_104 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_105 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_106 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_107 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_108 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_109 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_110 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_111 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_112 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_113 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_114 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_115 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_116 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_117 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_118 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_119 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_120 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_121 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_122 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_123 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_124 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_125 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_127 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_128 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_129 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_130 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_131 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_132 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_133 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_134 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_135 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_136 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_137 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_138 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_139 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_140 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_141 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_142 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_143 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_144 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_145 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_147 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_148 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_149 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_150 | 0.0 | 1.0 | 0.0 |
| HHJFGIKK_151 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_152 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_153 | 1.0 | 0.0 | 1.0 |
| HHJFGIKK_154 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)