Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ABBELFNK_85 | 10179 | 12098 | tet(O) | ARO:3000190 | tet(O) | 97.50 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ABBELFNK_85 | 10179 | 12098 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.27 | 100.00 | Y07780 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ABBELFNK_85 | 10179 | 12095 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.06 | 100.00 | WP_014636291.1 |
| ABBELFNK_86 | 6689 | 6889 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ABBELFNK_5 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_10 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_13 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_16 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_19 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_21 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_22 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_25 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_27 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_28 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_29 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_33 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_35 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_36 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_38 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_39 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_41 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_43 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_44 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_46 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_47 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_48 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_49 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_50 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_54 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_55 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_58 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_60 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_61 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_62 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_63 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_64 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_65 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_67 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_69 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_70 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_71 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_72 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_73 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_75 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_77 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_78 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_79 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_80 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_81 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_82 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_83 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_84 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_85 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_86 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_87 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_88 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_89 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_90 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_91 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_92 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_93 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_94 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_95 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_96 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_97 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_98 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_99 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_100 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_101 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_102 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_103 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_105 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_106 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_107 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_108 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_109 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_110 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_111 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_112 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_113 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_114 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_115 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_116 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_117 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_119 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_120 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_121 | 0.0 | 1.0 | 0.0 |
| ABBELFNK_122 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_124 | 1.0 | 0.0 | 1.0 |
| ABBELFNK_126 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ABBELFNK_48 | 36050 | 43657 | False | Unknown | VOG6524, |
| ABBELFNK_48 | 112924 | 127316 | False | Siphoviridae | VOG6464, |
Phigaro v2.4.0 (Database: Jan. 2024 release)