Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OMOCOOFK_55 | 13137 | 15056 | tet(W) | ARO:3000194 | tet(W) | 100.00 | 100.00 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OMOCOOFK_55 | 13137 | 15056 | tet(W) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | AJ427422 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OMOCOOFK_55 | 13140 | 15056 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | EXACTX | 100.00 | 100.00 | WP_002586627.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OMOCOOFK_1 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_2 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_3 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_4 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_5 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_7 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_9 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_10 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_11 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_12 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_13 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_14 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_22 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_33 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_44 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_55 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_59 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_60 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_61 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_62 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_63 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_64 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_65 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_66 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_67 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_68 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_69 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_70 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_71 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_72 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_73 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_74 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_75 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_76 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_77 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_78 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_79 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_80 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_81 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_82 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_83 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_84 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_85 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_86 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_87 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_88 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_89 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_90 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_91 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_92 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_93 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_94 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_95 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_96 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_97 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_98 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_99 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_100 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_101 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_102 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_103 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_104 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_105 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_106 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_107 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_108 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_109 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_110 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_111 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_112 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_113 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_114 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_115 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_116 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_117 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_118 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_119 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_120 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_121 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_122 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_123 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_124 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_125 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_127 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_128 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_129 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_130 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_131 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_132 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_133 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_134 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_135 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_136 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_137 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_138 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_139 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_140 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_141 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_142 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_143 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_144 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_146 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_147 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_148 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_149 | 0.0 | 1.0 | 0.0 |
| OMOCOOFK_150 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_151 | 1.0 | 0.0 | 1.0 |
| OMOCOOFK_152 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)