Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GGOAGNBK_93 | 13335 | 13535 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GGOAGNBK_1 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_2 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_3 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_4 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_5 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_6 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_8 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_9 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_10 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_12 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_13 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_14 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_18 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_24 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_29 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_32 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_34 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_37 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_40 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_41 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_44 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_45 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_46 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_48 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_49 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_51 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_53 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_55 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_57 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_59 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_60 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_61 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_62 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_64 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_65 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_67 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_69 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_72 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_73 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_74 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_75 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_77 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_78 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_79 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_80 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_81 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_83 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_84 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_85 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_87 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_88 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_89 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_90 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_91 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_92 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_93 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_95 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_96 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_98 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_99 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_100 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_101 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_102 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_103 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_104 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_105 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_106 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_107 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_108 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_109 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_110 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_111 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_112 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_113 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_114 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_115 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_116 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_117 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_118 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_119 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_120 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_121 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_122 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_123 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_124 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_125 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_126 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_127 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_128 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_129 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_130 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_131 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_132 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_134 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_135 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_136 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_137 | 0.0 | 1.0 | 0.0 |
| GGOAGNBK_138 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_139 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_140 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_141 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_142 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_143 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_144 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_145 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_146 | 1.0 | 0.0 | 1.0 |
| GGOAGNBK_147 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GGOAGNBK_62 | 101299 | 114742 | False | Siphoviridae | VOG0796, |
| GGOAGNBK_116 | 75926 | 100048 | False | Siphoviridae | VOG1893, |
Phigaro v2.4.0 (Database: Jan. 2024 release)