Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GOGPKFJN_98 | 1370 | 3289 | tet(O) | ARO:3000190 | tet(O) | 93.58 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GOGPKFJN_98 | 1370 | 3289 | tet(O/32/O) | Doxycycline, Tetracycline, Minocycline | 99.69 | 100.00 | AIOQ01000025 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GOGPKFJN_98 | 1373 | 3289 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 93.90 | 100.00 | WP_012669445.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GOGPKFJN_1 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_2 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_3 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_4 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_6 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_7 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_8 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_9 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_10 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_11 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_12 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_13 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_14 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_15 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_16 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_17 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_18 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_19 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_20 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_21 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_22 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_23 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_24 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_25 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_26 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_27 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_28 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_29 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_30 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_31 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_32 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_33 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_36 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_43 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_46 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_50 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_56 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_58 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_63 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_64 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_69 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_73 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_76 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_78 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_80 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_83 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_89 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_91 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_92 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_95 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_96 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_98 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_99 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_101 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_104 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_109 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_110 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_113 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_114 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_116 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_119 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_120 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_123 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_125 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_126 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_127 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_129 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_130 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_135 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_136 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_137 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_138 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_139 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_141 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_143 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_146 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_147 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_149 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_150 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_151 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_152 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_153 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_154 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_155 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_156 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_157 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_158 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_159 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_160 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_161 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_162 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_163 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_164 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_165 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_166 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_167 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_168 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_169 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_170 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_171 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_172 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_173 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_174 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_175 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_176 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_177 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_178 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_179 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_180 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_181 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_182 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_183 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_184 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_185 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_186 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_187 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_188 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_189 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_190 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_192 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_193 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_194 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_195 | 1.0 | 0.0 | 1.0 |
| GOGPKFJN_196 | 0.0 | 1.0 | 0.0 |
| GOGPKFJN_197 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)