Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GEFAEFBC_59 | 3 | 1916 | tet(O) | ARO:3000190 | tet(O) | 97.49 | 99.84 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GEFAEFBC_59 | 1 | 1916 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.32 | 99.79 | Y07780 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GEFAEFBC_59 | 3 | 1916 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.06 | 99.84 | WP_014636291.1 |
| GEFAEFBC_143 | 45488 | 45688 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GEFAEFBC_1 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_2 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_3 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_4 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_5 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_6 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_7 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_8 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_9 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_10 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_11 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_12 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_13 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_14 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_15 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_16 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_17 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_18 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_19 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_20 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_21 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_22 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_23 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_24 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_25 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_26 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_27 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_28 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_29 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_30 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_31 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_32 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_33 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_34 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_35 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_36 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_38 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_39 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_41 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_42 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_43 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_44 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_45 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_46 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_47 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_48 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_49 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_50 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_51 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_52 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_53 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_54 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_55 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_57 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_58 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_59 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_60 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_61 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_62 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_63 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_64 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_65 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_66 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_67 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_68 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_69 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_70 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_71 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_72 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_73 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_74 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_75 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_76 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_77 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_78 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_79 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_80 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_82 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_83 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_84 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_85 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_86 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_88 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_89 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_90 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_91 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_92 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_98 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_99 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_103 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_109 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_114 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_118 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_120 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_126 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_129 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_133 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_137 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_142 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_143 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_145 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_147 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_150 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_152 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_153 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_156 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_159 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_160 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_163 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_164 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_165 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_169 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_171 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_174 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_176 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_178 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_181 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_185 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_186 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_188 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_189 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_190 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_192 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_194 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_198 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_203 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_205 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_206 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_208 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_210 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_212 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_214 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_215 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_217 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_219 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_222 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_223 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_224 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_225 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_226 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_227 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_228 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_229 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_230 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_231 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_232 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_233 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_234 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_235 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_236 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_237 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_238 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_239 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_240 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_241 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_242 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_243 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_244 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_245 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_246 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_247 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_248 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_249 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_250 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_251 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_252 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_253 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_254 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_255 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_256 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_257 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_258 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_259 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_260 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_261 | 1.0 | 0.0 | 1.0 |
| GEFAEFBC_262 | 0.0 | 1.0 | 0.0 |
| GEFAEFBC_263 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)