Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| COGEGGMA_86 | 1370 | 3289 | tet(O) | ARO:3000190 | tet(O) | 93.58 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| COGEGGMA_86 | 1370 | 3289 | tet(O/32/O) | Doxycycline, Tetracycline, Minocycline | 99.69 | 100.00 | AIOQ01000025 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| COGEGGMA_86 | 1373 | 3289 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 93.90 | 100.00 | WP_012669445.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| COGEGGMA_1 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_3 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_6 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_7 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_8 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_9 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_10 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_11 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_12 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_13 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_14 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_15 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_19 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_20 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_21 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_23 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_24 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_25 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_27 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_29 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_30 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_31 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_32 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_33 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_34 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_35 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_36 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_37 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_39 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_40 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_42 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_43 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_44 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_45 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_46 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_47 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_48 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_49 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_50 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_51 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_52 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_58 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_61 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_63 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_64 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_66 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_69 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_71 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_73 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_75 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_78 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_80 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_82 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_83 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_86 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_87 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_89 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_90 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_93 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_95 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_98 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_100 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_101 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_104 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_107 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_110 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_111 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_113 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_116 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_117 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_118 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_121 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_124 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_126 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_129 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_130 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_131 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_132 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_135 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_138 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_140 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_142 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_143 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_145 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_147 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_149 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_150 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_151 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_152 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_154 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_156 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_157 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_158 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_159 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_160 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_162 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_164 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_166 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_167 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_168 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_170 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_172 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_174 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_176 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_177 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_178 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_179 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_181 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_183 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_184 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_185 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_186 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_187 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_188 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_190 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_191 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_192 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_194 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_196 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_200 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_201 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_205 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_206 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_207 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_208 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_209 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_210 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_213 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_214 | 1.0 | 0.0 | 1.0 |
| COGEGGMA_215 | 0.0 | 1.0 | 0.0 |
| COGEGGMA_216 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)