Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DLDDNNCP_66 | 59186 | 61105 | tet(O) | ARO:3000190 | tet(O) | 97.50 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DLDDNNCP_66 | 59186 | 61105 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.27 | 100.00 | Y07780 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DLDDNNCP_66 | 59189 | 61105 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.06 | 100.00 | WP_014636291.1 |
| DLDDNNCP_144 | 4290 | 4490 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DLDDNNCP_1 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_2 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_3 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_4 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_5 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_6 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_8 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_9 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_10 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_11 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_12 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_14 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_15 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_19 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_26 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_33 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_40 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_44 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_49 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_51 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_55 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_59 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_60 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_61 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_63 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_66 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_71 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_74 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_75 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_77 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_79 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_80 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_82 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_83 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_86 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_88 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_90 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_92 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_93 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_95 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_96 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_99 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_101 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_103 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_104 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_106 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_107 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_108 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_110 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_113 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_115 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_118 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_120 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_122 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_124 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_125 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_126 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_130 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_131 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_132 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_133 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_135 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_136 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_137 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_138 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_139 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_140 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_141 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_142 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_143 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_144 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_145 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_146 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_147 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_148 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_149 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_150 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_151 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_152 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_153 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_154 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_155 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_156 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_157 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_158 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_159 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_161 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_162 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_163 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_164 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_165 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_166 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_168 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_169 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_170 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_171 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_172 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_173 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_174 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_175 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_176 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_177 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_178 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_179 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_180 | 1.0 | 0.0 | 1.0 |
| DLDDNNCP_181 | 0.0 | 1.0 | 0.0 |
| DLDDNNCP_182 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)