Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FEJPEMIE_280 | 58823 | 59527 | WalR | 4.74e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| FEJPEMIE_230 | 413 | 216 | CspR | 5.48e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FEJPEMIE_217 | 12772 | 13833 | repUS74 | 1062 / 1062 | 92.47 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FEJPEMIE_1 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_2 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_3 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_4 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_5 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_6 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_7 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_8 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_9 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_10 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_11 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_12 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_13 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_14 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_15 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_16 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_17 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_18 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_19 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_20 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_21 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_22 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_23 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_24 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_26 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_27 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_28 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_29 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_30 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_31 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_32 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_33 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_34 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_35 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_36 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_37 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_38 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_39 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_40 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_41 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_42 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_43 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_44 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_45 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_46 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_47 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_50 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_52 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_53 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_54 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_55 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_56 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_57 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_58 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_59 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_60 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_61 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_62 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_63 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_64 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_65 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_66 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_67 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_68 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_69 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_70 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_71 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_72 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_73 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_74 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_75 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_76 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_77 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_78 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_79 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_88 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_99 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_110 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_111 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_122 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_133 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_144 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_155 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_166 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_177 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_188 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_199 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_201 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_202 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_203 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_204 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_205 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_206 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_207 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_208 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_209 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_210 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_211 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_212 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_213 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_214 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_215 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_216 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_217 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_218 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_219 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_220 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_221 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_222 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_223 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_224 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_225 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_226 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_227 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_228 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_229 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_230 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_231 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_232 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_233 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_234 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_235 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_236 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_237 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_238 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_239 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_240 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_241 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_242 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_243 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_244 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_245 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_246 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_247 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_248 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_249 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_250 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_251 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_252 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_253 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_254 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_255 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_256 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_257 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_258 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_259 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_260 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_261 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_262 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_263 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_264 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_265 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_266 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_267 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_268 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_269 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_270 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_271 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_272 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_273 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_274 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_275 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_276 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_277 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_278 | 1.0 | 0.0 | 1.0 |
| FEJPEMIE_279 | 0.0 | 1.0 | 0.0 |
| FEJPEMIE_280 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FEJPEMIE_11 | 7542 | 46398 | False | Siphoviridae | VOG5353, VOG4552, VOG0181, VOG10867, VOG3642, VOG4799, VOG0025, VOG7735, VOG4693, VOG9741, VOG4567, VOG4237, VOG0152, VOG3643, VOG3643, VOG0044, VOG10584, VOG1563, VOG0198, VOG4570, VOG10904, VOG4549, VOG1345, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG10303, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG6163, VOG4605, VOG4599, VOG6455, VOG1637, VOG0703, VOG4918, VOG3412 |
| FEJPEMIE_214 | 47759 | 79865 | False | Siphoviridae | VOG10484, VOG9667, VOG8520, VOG8520, VOG7236, VOG0181, VOG10867, VOG1302, VOG4967, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG5998, VOG6795, VOG5562, VOG0198, VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG4545, VOG4633, VOG4763, VOG3498, VOG3498, VOG0648, VOG1637 |
| FEJPEMIE_225 | 44022 | 67843 | False | Siphoviridae | VOG4615, VOG0703, VOG7888, VOG7896, VOG6455, VOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG1887, VOG3434, VOG4555, VOG1183, VOG4564, VOG0720, VOG4544, VOG0796, VOG4570, VOG4643 |
| FEJPEMIE_225 | 73202 | 78697 | False | Siphoviridae | VOG2820, VOG0536, VOG9860, VOG0226, VOG4566, VOG4566, VOG0186, VOG1309 |
Phigaro v2.4.0 (Database: Jan. 2024 release)