Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BGFHOOEN_86 | 7374 | 7177 | CspR | 3.12e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| BGFHOOEN_86 | 7374 | 7177 | CspA | 5.81e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BGFHOOEN_104 | 8660 | 9202 | rep38 | 543 / 903 | 86.00 | CP005943 |
| BGFHOOEN_75 | 35366 | 36301 | rep28 | 944 / 936 | 81.57 | CP005948 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BGFHOOEN_1 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_2 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_3 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_4 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_6 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_7 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_8 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_9 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_10 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_11 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_13 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_14 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_15 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_18 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_20 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_21 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_22 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_24 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_25 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_26 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_27 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_28 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_29 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_30 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_32 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_33 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_34 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_35 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_45 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_55 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_64 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_75 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_81 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_82 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_83 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_84 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_85 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_86 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_87 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_88 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_89 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_90 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_91 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_92 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_93 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_94 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_95 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_96 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_97 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_98 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_99 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_100 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_101 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_102 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_103 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_104 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_105 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_106 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_107 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_108 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_109 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_110 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_111 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_112 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_113 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_114 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_115 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_116 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_117 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_118 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_119 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_120 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_121 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_122 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_123 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_124 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_125 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_126 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_127 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_128 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_129 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_130 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_131 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_132 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_133 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_134 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_135 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_136 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_137 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_138 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_139 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_141 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_142 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_143 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_144 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_145 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_146 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_147 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_148 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_149 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_150 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_151 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_152 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_153 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_154 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_155 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_156 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_158 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_159 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_160 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_161 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_162 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_163 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_164 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_165 | 0.0 | 1.0 | 0.0 |
| BGFHOOEN_167 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_168 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_169 | 1.0 | 0.0 | 1.0 |
| BGFHOOEN_170 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BGFHOOEN_1 | 47990 | 76216 | False | Siphoviridae | VOG8917, VOG9880, VOG4856, VOG9997, VOG10972, VOG3462, VOG0801, VOG8263, VOG6698, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4581, VOG4841, VOG3349 |
| BGFHOOEN_1 | 82331 | 93142 | False | Myoviridae / Siphoviridae | VOG1298, VOG0638, VOG0425, VOG4813, VOG4693, VOG4237, VOG8685, VOG0189, VOG8647, VOG0514, VOG0226, VOG0186, VOG1309 |
| BGFHOOEN_127 | 22913 | 42692 | False | Myoviridae / Siphoviridae | VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085, VOG0025, VOG8295, VOG1176, VOG10457 |
Phigaro v2.4.0 (Database: Jan. 2024 release)