Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BDGOKFIM_117 | 21480 | 21677 | CspA | 4.65e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| BDGOKFIM_117 | 21480 | 21674 | CspR | 2.02e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BDGOKFIM_1 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_2 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_3 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_4 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_5 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_6 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_7 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_9 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_10 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_11 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_12 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_13 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_14 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_15 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_16 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_17 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_18 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_19 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_20 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_21 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_22 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_23 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_24 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_25 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_26 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_27 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_28 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_29 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_30 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_32 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_33 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_34 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_35 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_36 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_38 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_39 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_40 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_41 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_42 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_43 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_44 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_45 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_46 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_47 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_48 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_50 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_52 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_53 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_55 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_56 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_57 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_58 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_59 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_60 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_61 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_62 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_63 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_65 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_67 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_69 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_70 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_71 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_72 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_73 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_75 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_76 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_77 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_78 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_79 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_80 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_81 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_82 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_83 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_84 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_85 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_86 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_87 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_88 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_89 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_90 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_91 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_92 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_93 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_94 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_95 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_96 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_97 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_98 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_99 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_100 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_101 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_102 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_103 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_104 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_105 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_106 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_108 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_109 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_110 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_111 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_112 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_113 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_114 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_115 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_116 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_117 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_118 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_119 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_120 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_121 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_122 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_123 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_124 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_125 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_126 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_127 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_129 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_130 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_131 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_132 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_133 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_134 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_135 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_136 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_137 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_138 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_139 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_140 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_141 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_142 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_143 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_144 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_145 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_146 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_147 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_148 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_149 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_150 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_151 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_152 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_153 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_154 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_155 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_156 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_157 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_158 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_159 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_160 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_161 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_162 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_163 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_164 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_165 | 0.0 | 1.0 | 0.0 |
| BDGOKFIM_167 | 1.0 | 0.0 | 1.0 |
| BDGOKFIM_168 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BDGOKFIM_95 | 2718 | 23645 | False | Siphoviridae | VOG4581, VOG1886, VOG4556, VOG4568, VOG0204, VOG0205, VOG4317, VOG0207, VOG4586, VOG0209, VOG6163, VOG0801, VOG3462, VOG10223, VOG5361, VOG5361, VOG4856, VOG4334, VOG7896, VOG8917 |
| BDGOKFIM_101 | 45883 | 53922 | False | Siphoviridae | VOG0275, VOG4585, VOG1159, VOG4677 |
Phigaro v2.4.0 (Database: Jan. 2024 release)