Probiotic potential risk score


ARGs VFs PGs PPRS
0000.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
CPMAHIBI_10.01.00.0
CPMAHIBI_20.01.00.0
CPMAHIBI_30.01.00.0
CPMAHIBI_40.01.00.0
CPMAHIBI_50.01.00.0
CPMAHIBI_60.01.00.0
CPMAHIBI_70.01.00.0
CPMAHIBI_80.01.00.0
CPMAHIBI_90.01.00.0
CPMAHIBI_100.01.00.0
CPMAHIBI_110.01.00.0
CPMAHIBI_120.01.00.0
CPMAHIBI_130.01.00.0
CPMAHIBI_140.01.00.0
CPMAHIBI_150.01.00.0
CPMAHIBI_160.01.00.0
CPMAHIBI_170.01.00.0
CPMAHIBI_180.01.00.0
CPMAHIBI_190.01.00.0
CPMAHIBI_200.01.00.0
CPMAHIBI_210.01.00.0
CPMAHIBI_220.01.00.0
CPMAHIBI_230.01.00.0
CPMAHIBI_240.01.00.0
CPMAHIBI_250.01.00.0
CPMAHIBI_260.01.00.0
CPMAHIBI_271.00.01.0
CPMAHIBI_280.01.00.0
CPMAHIBI_290.01.00.0
CPMAHIBI_300.01.00.0
CPMAHIBI_310.01.00.0
CPMAHIBI_320.01.00.0
CPMAHIBI_330.01.00.0
CPMAHIBI_340.01.00.0
CPMAHIBI_351.00.01.0
CPMAHIBI_360.01.00.0
CPMAHIBI_370.01.00.0
CPMAHIBI_380.01.00.0
CPMAHIBI_391.00.01.0
CPMAHIBI_400.01.00.0
CPMAHIBI_410.01.00.0
CPMAHIBI_421.00.01.0
CPMAHIBI_430.01.00.0
CPMAHIBI_440.01.00.0
CPMAHIBI_450.01.00.0
CPMAHIBI_460.01.00.0
CPMAHIBI_470.01.00.0
CPMAHIBI_481.00.01.0
CPMAHIBI_490.01.00.0
CPMAHIBI_501.00.01.0
CPMAHIBI_510.01.00.0
CPMAHIBI_520.01.00.0
CPMAHIBI_530.01.00.0
CPMAHIBI_540.01.00.0
CPMAHIBI_550.01.00.0
CPMAHIBI_560.01.00.0
CPMAHIBI_570.01.00.0
CPMAHIBI_581.00.01.0
CPMAHIBI_591.00.01.0
CPMAHIBI_600.01.00.0
CPMAHIBI_610.01.00.0
CPMAHIBI_621.00.01.0
CPMAHIBI_630.01.00.0
CPMAHIBI_641.00.01.0
CPMAHIBI_650.01.00.0
CPMAHIBI_660.01.00.0
CPMAHIBI_670.01.00.0
CPMAHIBI_681.00.01.0
CPMAHIBI_701.00.01.0
CPMAHIBI_711.00.01.0
CPMAHIBI_721.00.01.0
CPMAHIBI_731.00.01.0
CPMAHIBI_741.00.01.0
CPMAHIBI_751.00.01.0
CPMAHIBI_761.00.01.0
CPMAHIBI_771.00.01.0
CPMAHIBI_780.01.00.0
CPMAHIBI_790.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
CPMAHIBI_21623824517FalseSiphoviridaeVOG0847,

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements