Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LLEGFBBK_5 | 49583 | 49780 | CspA | 8.78e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| LLEGFBBK_5 | 49583 | 49777 | CspR | 1.59e-28 | cold shock protein | 84.61 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LLEGFBBK_1 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_2 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_3 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_4 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_5 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_6 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_7 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_8 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_9 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_10 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_11 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_12 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_13 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_14 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_15 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_16 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_17 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_18 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_19 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_20 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_21 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_22 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_23 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_24 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_25 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_26 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_27 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_28 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_29 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_30 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_31 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_32 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_33 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_34 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_35 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_36 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_37 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_38 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_39 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_40 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_41 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_42 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_43 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_44 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_45 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_46 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_47 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_48 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_49 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_50 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_51 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_52 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_53 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_54 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_55 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_56 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_57 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_58 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_59 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_60 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_61 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_62 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_63 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_64 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_65 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_66 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_67 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_68 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_69 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_70 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_71 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_72 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_73 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_74 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_76 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_77 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_78 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_79 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_80 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_81 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_82 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_83 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_84 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_85 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_86 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_87 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_88 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_89 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_90 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_92 | 0.0 | 1.0 | 0.0 |
| LLEGFBBK_93 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_94 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_95 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_96 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_97 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_98 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_99 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_100 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_101 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_102 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_104 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_105 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_106 | 1.0 | 0.0 | 1.0 |
| LLEGFBBK_107 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LLEGFBBK_2 | 7026 | 13360 | False | Myoviridae | VOG0205, VOG0384, VOG0382, VOG0083 |
| LLEGFBBK_14 | 3996 | 36591 | False | Siphoviridae | VOG1637, VOG10223, VOG4856, VOG9997, VOG10972, VOG3462, VOG0801, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0249, VOG3477, VOG0198, VOG0536, VOG8685, VOG0189, VOG4566, VOG0550, VOG0226, VOG0186, VOG1309 |
Phigaro v2.4.0 (Database: Jan. 2024 release)