Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OOLBLJKC_27 | 7020 | 6313 | WalR | 5.45e-117 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| OOLBLJKC_23 | 95243 | 95046 | CspR | 2.56e-28 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| OOLBLJKC_23 | 95243 | 95049 | CspA | 1.25e-27 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OOLBLJKC_1 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_2 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_3 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_4 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_5 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_6 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_7 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_8 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_9 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_10 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_11 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_12 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_13 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_14 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_15 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_16 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_17 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_18 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_19 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_20 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_21 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_22 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_23 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_24 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_25 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_26 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_27 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_28 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_29 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_30 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_31 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_32 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_33 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_34 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_35 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_36 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_37 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_38 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_39 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_40 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_41 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_43 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_44 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_45 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_47 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_48 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_49 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_51 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_53 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_55 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_56 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_57 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_58 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_59 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_60 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_61 | 0.0 | 1.0 | 0.0 |
| OOLBLJKC_62 | 1.0 | 0.0 | 1.0 |
| OOLBLJKC_63 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OOLBLJKC_1 | 2591 | 36406 | False | Siphoviridae | VOG10223, VOG5221, VOG4705, VOG4334, VOG10868, VOG4856, VOG3462, VOG0801, VOG4545, VOG4586, VOG0207, VOG9583, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0249, VOG0198, VOG0327, VOG4609, VOG4632, VOG6545, VOG0322, VOG4548, VOG0321, VOG3947, VOG3478, VOG4552, VOG9667 |
| OOLBLJKC_56 | 72946 | 94952 | False | Siphoviridae | VOG0703, VOG1637, VOG4705, VOG4334, VOG4599, VOG5008, VOG4828, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0866 |
Phigaro v2.4.0 (Database: Jan. 2024 release)