Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CLKCHHHA_100 | 47954 | 48844 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| CLKCHHHA_133 | 4316 | 6241 | tet(Q) | ARO:3000191 | tet(Q) | 98.75 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CLKCHHHA_133 | 4316 | 6241 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.01 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CLKCHHHA_100 | 47954 | 48841 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| CLKCHHHA_133 | 4319 | 6241 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.75 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CLKCHHHA_1 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_2 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_3 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_4 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_5 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_6 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_7 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_8 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_9 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_10 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_11 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_12 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_13 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_14 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_15 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_16 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_17 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_18 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_19 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_20 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_21 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_22 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_23 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_24 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_25 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_26 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_27 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_28 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_29 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_30 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_31 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_32 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_33 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_34 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_35 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_36 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_37 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_38 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_40 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_41 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_42 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_43 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_44 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_45 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_46 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_47 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_48 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_49 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_50 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_51 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_52 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_53 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_54 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_55 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_56 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_57 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_58 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_59 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_60 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_61 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_62 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_63 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_64 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_65 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_66 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_68 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_69 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_70 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_71 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_72 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_73 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_74 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_75 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_76 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_77 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_78 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_79 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_80 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_81 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_82 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_83 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_85 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_88 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_93 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_94 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_95 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_96 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_97 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_98 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_99 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_100 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_101 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_102 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_103 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_104 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_105 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_106 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_107 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_108 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_109 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_110 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_111 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_112 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_113 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_114 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_115 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_116 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_117 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_118 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_119 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_120 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_121 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_122 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_123 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_124 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_125 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_126 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_127 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_128 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_129 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_130 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_131 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_132 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_133 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_134 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_135 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_136 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_137 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_138 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_139 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_140 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_141 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_142 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_143 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_144 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_145 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_146 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_147 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_148 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_149 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_150 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_151 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_152 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_153 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_154 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_155 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_156 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_157 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_158 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_159 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_160 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_161 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_162 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_163 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_164 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_165 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_166 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_167 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_168 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_169 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_170 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_171 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_172 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_173 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_174 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_175 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_176 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_177 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_178 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_179 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_180 | 1.0 | 0.0 | 1.0 |
| CLKCHHHA_181 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_182 | 0.0 | 1.0 | 0.0 |
| CLKCHHHA_183 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)