Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CKJKEJKL_331 | 360 | 64 | GzCCAAT008 | 2.27e-61 | transcription factor | 92.93 | 73.88 | FGSG_11627 |
| CKJKEJKL_186 | 12438 | 12635 | CspA | 1.53e-29 | cold shock protein | 81.82 | 100.00 | CAA62903 |
| CKJKEJKL_186 | 12438 | 12632 | CspR | 5.17e-29 | cold shock protein | 83.08 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CKJKEJKL_21 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_25 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_29 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_30 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_32 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_33 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_35 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_36 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_37 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_43 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_44 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_47 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_48 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_50 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_51 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_55 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_56 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_57 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_58 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_59 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_60 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_61 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_62 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_63 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_65 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_69 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_70 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_71 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_72 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_73 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_74 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_75 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_77 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_78 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_80 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_81 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_82 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_83 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_84 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_86 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_87 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_88 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_89 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_90 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_91 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_92 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_93 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_94 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_95 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_96 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_98 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_99 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_100 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_101 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_102 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_103 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_105 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_106 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_107 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_108 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_109 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_111 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_112 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_113 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_114 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_115 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_116 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_117 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_118 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_119 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_121 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_122 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_124 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_126 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_128 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_129 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_130 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_131 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_132 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_133 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_134 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_135 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_136 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_137 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_138 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_139 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_140 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_141 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_142 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_143 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_144 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_145 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_147 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_149 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_151 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_152 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_153 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_154 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_155 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_156 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_157 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_158 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_159 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_160 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_161 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_162 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_163 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_164 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_165 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_169 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_170 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_171 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_172 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_173 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_174 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_175 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_176 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_177 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_178 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_179 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_181 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_182 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_183 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_184 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_185 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_186 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_187 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_188 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_189 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_190 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_191 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_192 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_193 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_194 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_195 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_196 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_197 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_199 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_200 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_201 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_202 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_203 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_205 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_206 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_208 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_210 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_221 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_226 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_227 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_228 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_229 | 1.0 | 0.0 | 1.0 |
| CKJKEJKL_231 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_232 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_236 | 0.0 | 1.0 | 0.0 |
| CKJKEJKL_338 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CKJKEJKL_129 | 12936 | 28229 | False | Myoviridae / Siphoviridae | VOG10462, VOG4548, VOG0291, VOG3101, VOG0083, VOG0322, VOG0052, VOG0322, VOG5526, VOG3479, VOG2806 |
Phigaro v2.4.0 (Database: Jan. 2024 release)